| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2677 |
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| Symbol | |
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| ID | 6116976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3276452 |
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| End bp | 3277396 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634208 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001761048 |
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| Protein GI | 170727022 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.297592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAAACT TTGATTTTAA CTTGCTTACT GTACTCGAAG TTCTGCTTGA AGAGAAAAGT
GTCACCTCAG CAGCGGCGCG TTTGCACTTA AGCCAGTCAG CCGTCAGTAA ACAGCTAGCC
AGATTACGAG ACACCTTCGA TGATAAGCTG TTTGAACGTA CATCACATGG ATTAAGGCCC
ACACCTAAAG CATTAGCATT GGCCCCAGAG TTGCGTCAGG TACTCAATCA AGTCTCCCAA
CTTACCCGTC CCAGTGATTT TGAACCTGAG CTGAGTCAGA GAAAGTTCCG TATCCATATG
GTAGAGACCG CTTACTCGCT CACTTATCCC TATTTTATGC CGGAGCTACT GCAGCAAGCC
CCAAAAATTA AATTAGATAG CCAAACCTGG CACCATAACA GTATGGAGAT GCTACTGCGT
TGTGAGGTCG ATTTAGGGAT TGCATGCCGA GAATGGGATA ATCGATCGCT AATGCATATC
AAGAATATAC CCGATGAGTT GGAGTATGTT GAGCTACTTC GAGATCACCC AATCTGCTTA
GTGAGTAATC ATCACCCACT GCTCAAGGAG CCATGGAACT TAGACACATT TTTAAAATAT
CGCCACCTGC AGGTCACCTT TGGCGGCATC GAACACTGGC TTTTGGATGA TGTACTGAAG
TTATCTCATC TTGACCGTGA TATCGCAGTG AATATGAGTG ACTTTACTAG TGCAATGCAG
CTGTGTGAGC AGAGTGAATT GCTTCTGTGC TGTCCGGCAA AATATGCATC TCAGATGAGC
CAGAATTACG CCCTCACCAC ATTAACCGTA CCAACAGATC TAATCCCAGG TGCTTACGTA
CTATTTTGGC ATAAACACTT TAACTTCGAT CTTAGTCATT CCTGGTTAAG GGAGTTGATA
GCTACTCGCA CAATTGCCTA TCATCAGGCC AATCTATTGA GTTAG
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| Protein sequence | MKNFDFNLLT VLEVLLEEKS VTSAAARLHL SQSAVSKQLA RLRDTFDDKL FERTSHGLRP
TPKALALAPE LRQVLNQVSQ LTRPSDFEPE LSQRKFRIHM VETAYSLTYP YFMPELLQQA
PKIKLDSQTW HHNSMEMLLR CEVDLGIACR EWDNRSLMHI KNIPDELEYV ELLRDHPICL
VSNHHPLLKE PWNLDTFLKY RHLQVTFGGI EHWLLDDVLK LSHLDRDIAV NMSDFTSAMQ
LCEQSELLLC CPAKYASQMS QNYALTTLTV PTDLIPGAYV LFWHKHFNFD LSHSWLRELI
ATRTIAYHQA NLLS
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