Gene Swoo_2666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2666 
Symbol 
ID6116965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3264646 
End bp3266841 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content48% 
IMG OID641634197 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001761037 
Protein GI170727011 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.785102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTA AATCTTATTA TCTTTTGGCT TCAACTTTAG CCATGGTCGC AAGTAACCCA 
ACTCTCGCAG ATGAAAGCAA AGGAGCGGTA TCATCTAACT TCAAGGTGAG TGAGGAGCAG
AGGCCTGAGG CTGAGCTTAA GATGTTTAAA CTCTCCCTTG ACGATAACTG GCTAGGGGAA
AGCTCTGCCC ACCGAGGAGT GTTATCAGGC AAAGCGTTAT CACAAGAGGA GGTAATGGAA
CTGCTTCAGC GTGAAGGACG CCTGCACCCA TCAAAAATGA CCGTTGCATT AGATGATGGA
GAGGCCAGAG ACATTGGGCG TTTCCAGTCA GAGCTGACGG CGGATGGAGT GATGCTATCA
GAGATTAACC AGCAACTTCA GCGGGCAAAA TACCAATGGG AAGCCTGTTT GGAGACTGAG
CTTGCTGAGG GCGCATTTAC CTTTTGTATT AGCTCACCTT TAATTCCTAA TCGCTATCTA
ATTCAGTTAG ATAGGCGTAT CGATACTAAA GAGTTGGCCA ATGTTGCCAG TGAATTAACT
AGCAGCGTCA ACGGTAGGTT AGATTATCTT TATGACTCTG TATTTCATGG GTTCTCAGGC
GTGATAGATA AAGAGGGCTT AGCCCGTTTA GAAAATGAGT CTATGGTGAT CGATATCCAG
CGAGATAATC TCGTGCATCT TCATACGATC CAAAACCCGG TACCTTCTTG GGGGATGGAT
CGAATCGACG AGAGACCACT TAACCTAGAT AGCCGATTTA CCTACCAGGA AAACGGTGCC
GGCGTGGATG TTTATGTGAT TGACTCAGGT CTTCGTGCCT CCCATCTTGA TTTTTCTGGT
CGAGTGGGCA CAGGAGCGAG TTTTGTCGGT GGTAGCCCAA ATACAGATTG TATCGGTCAT
GGTACCCATG TGGCGGGTAC CACGTTAGGA ACGCGCCATG GTTTAGCTAA GGGAGCAACG
GTCCACCCAG TACGTGTATT TGGCTGTACC GGAAGCTCGA CAACGGCCAC CATAGTGGCG
GGTGTGAACT GGGTAACGGC GAATGCTGGT GGAACAGGTG TCGCAAACAT GAGTTTAGGG
GGAGGGGGGA GTACGGCTAT AGATAGCGCC GTTCAAACCT CAATTAACTC AGGGGTCACT
TACGTGGTTT CAGCGGGAAA CAGTAATGCT AACGCTTGTG GTTTCTCTCC GGCCAGAGTG
AATGATGCGA TAACCGTAGG CTCTACCACT GATCAAGATA AGCGCTCATC TTTTTCCAAT
AAAGGGAGCT GTGTGGATAT TTTTGCACCA GGTTCTGATA TCACCTCAGC CTGGATAGGC
TCGAATACGG CCACTAATAC CATCAGCGGC ACCTCAATGT CCGCGCCCCA TGTCACAGGT
ATTGCGGCGC TTCTTTTAGC TCAAAATCCA GCTGCGACAC CTGCAGATAT CATGTCACAG
GTGATAGGCG ATGCTACATC TGGAGTGCTT TCTAGCATAG GTAGTGGTTC GCCAGATCTA
TTAGCCTTTT GGAAGCAGCC CTGTACCGAT CCTGTGATTG CCCATGATGG CAGTGTTATT
ACCCCTTGGT TTGATAGCCA GAATTGTTAT GTAACTCCCG TTCCAAGTGG ACATAATGCA
TTTATCTGGT CAGGTAAATA TTATGTTGAG CCAAGCTTTA CAGATTGTCC TCTGGGCAGT
TACGACGGCG CAAACTGCTA CGTGATGACT AAACCTTCAA CAGGCTTTAT CTACGCCAAT
AACTTTTATC ATCAATATGA TGCTTGCTCA GTCGGCAGTG ATGATTCTGC AAACTGCTAT
ATCGCTTCAG CTGCAGGCGG AACAACGGCT TTCGAGTGGG GCGGGAACTT TTATACCACA
CCACTGCCAG GTAATGTGTG CCCAATTGGA AGCTTTGATG GTGCTAACTG TTATGTGATG
ACTAAGCCTG CGACAGGTTT TATCTACGCC AATAATTTCT ACTCTGAATA TAATGCTTGC
TCTATTGGTA GTGATGATTC AGCTAACTGC TATATTGCAT CAGCGCCCGC GGGGACAACA
GCCTTTATCT ATGCAGGTAA CTTCTATACC ACGCCAACGG GAGTGGCATC TTGCCCATCA
AACAGTGTTT ATGATGGTGC TAACTGCTTT ATCGCGACAG CGCCAAATGG TTCAAGCCCC
TTTATCTGGG GAGGAAACTT CTATTACGCA GACTAA
 
Protein sequence
MKLKSYYLLA STLAMVASNP TLADESKGAV SSNFKVSEEQ RPEAELKMFK LSLDDNWLGE 
SSAHRGVLSG KALSQEEVME LLQREGRLHP SKMTVALDDG EARDIGRFQS ELTADGVMLS
EINQQLQRAK YQWEACLETE LAEGAFTFCI SSPLIPNRYL IQLDRRIDTK ELANVASELT
SSVNGRLDYL YDSVFHGFSG VIDKEGLARL ENESMVIDIQ RDNLVHLHTI QNPVPSWGMD
RIDERPLNLD SRFTYQENGA GVDVYVIDSG LRASHLDFSG RVGTGASFVG GSPNTDCIGH
GTHVAGTTLG TRHGLAKGAT VHPVRVFGCT GSSTTATIVA GVNWVTANAG GTGVANMSLG
GGGSTAIDSA VQTSINSGVT YVVSAGNSNA NACGFSPARV NDAITVGSTT DQDKRSSFSN
KGSCVDIFAP GSDITSAWIG SNTATNTISG TSMSAPHVTG IAALLLAQNP AATPADIMSQ
VIGDATSGVL SSIGSGSPDL LAFWKQPCTD PVIAHDGSVI TPWFDSQNCY VTPVPSGHNA
FIWSGKYYVE PSFTDCPLGS YDGANCYVMT KPSTGFIYAN NFYHQYDACS VGSDDSANCY
IASAAGGTTA FEWGGNFYTT PLPGNVCPIG SFDGANCYVM TKPATGFIYA NNFYSEYNAC
SIGSDDSANC YIASAPAGTT AFIYAGNFYT TPTGVASCPS NSVYDGANCF IATAPNGSSP
FIWGGNFYYA D