Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2666 |
Symbol | |
ID | 6116965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3264646 |
End bp | 3266841 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641634197 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_001761037 |
Protein GI | 170727011 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.785102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTTA AATCTTATTA TCTTTTGGCT TCAACTTTAG CCATGGTCGC AAGTAACCCA ACTCTCGCAG ATGAAAGCAA AGGAGCGGTA TCATCTAACT TCAAGGTGAG TGAGGAGCAG AGGCCTGAGG CTGAGCTTAA GATGTTTAAA CTCTCCCTTG ACGATAACTG GCTAGGGGAA AGCTCTGCCC ACCGAGGAGT GTTATCAGGC AAAGCGTTAT CACAAGAGGA GGTAATGGAA CTGCTTCAGC GTGAAGGACG CCTGCACCCA TCAAAAATGA CCGTTGCATT AGATGATGGA GAGGCCAGAG ACATTGGGCG TTTCCAGTCA GAGCTGACGG CGGATGGAGT GATGCTATCA GAGATTAACC AGCAACTTCA GCGGGCAAAA TACCAATGGG AAGCCTGTTT GGAGACTGAG CTTGCTGAGG GCGCATTTAC CTTTTGTATT AGCTCACCTT TAATTCCTAA TCGCTATCTA ATTCAGTTAG ATAGGCGTAT CGATACTAAA GAGTTGGCCA ATGTTGCCAG TGAATTAACT AGCAGCGTCA ACGGTAGGTT AGATTATCTT TATGACTCTG TATTTCATGG GTTCTCAGGC GTGATAGATA AAGAGGGCTT AGCCCGTTTA GAAAATGAGT CTATGGTGAT CGATATCCAG CGAGATAATC TCGTGCATCT TCATACGATC CAAAACCCGG TACCTTCTTG GGGGATGGAT CGAATCGACG AGAGACCACT TAACCTAGAT AGCCGATTTA CCTACCAGGA AAACGGTGCC GGCGTGGATG TTTATGTGAT TGACTCAGGT CTTCGTGCCT CCCATCTTGA TTTTTCTGGT CGAGTGGGCA CAGGAGCGAG TTTTGTCGGT GGTAGCCCAA ATACAGATTG TATCGGTCAT GGTACCCATG TGGCGGGTAC CACGTTAGGA ACGCGCCATG GTTTAGCTAA GGGAGCAACG GTCCACCCAG TACGTGTATT TGGCTGTACC GGAAGCTCGA CAACGGCCAC CATAGTGGCG GGTGTGAACT GGGTAACGGC GAATGCTGGT GGAACAGGTG TCGCAAACAT GAGTTTAGGG GGAGGGGGGA GTACGGCTAT AGATAGCGCC GTTCAAACCT CAATTAACTC AGGGGTCACT TACGTGGTTT CAGCGGGAAA CAGTAATGCT AACGCTTGTG GTTTCTCTCC GGCCAGAGTG AATGATGCGA TAACCGTAGG CTCTACCACT GATCAAGATA AGCGCTCATC TTTTTCCAAT AAAGGGAGCT GTGTGGATAT TTTTGCACCA GGTTCTGATA TCACCTCAGC CTGGATAGGC TCGAATACGG CCACTAATAC CATCAGCGGC ACCTCAATGT CCGCGCCCCA TGTCACAGGT ATTGCGGCGC TTCTTTTAGC TCAAAATCCA GCTGCGACAC CTGCAGATAT CATGTCACAG GTGATAGGCG ATGCTACATC TGGAGTGCTT TCTAGCATAG GTAGTGGTTC GCCAGATCTA TTAGCCTTTT GGAAGCAGCC CTGTACCGAT CCTGTGATTG CCCATGATGG CAGTGTTATT ACCCCTTGGT TTGATAGCCA GAATTGTTAT GTAACTCCCG TTCCAAGTGG ACATAATGCA TTTATCTGGT CAGGTAAATA TTATGTTGAG CCAAGCTTTA CAGATTGTCC TCTGGGCAGT TACGACGGCG CAAACTGCTA CGTGATGACT AAACCTTCAA CAGGCTTTAT CTACGCCAAT AACTTTTATC ATCAATATGA TGCTTGCTCA GTCGGCAGTG ATGATTCTGC AAACTGCTAT ATCGCTTCAG CTGCAGGCGG AACAACGGCT TTCGAGTGGG GCGGGAACTT TTATACCACA CCACTGCCAG GTAATGTGTG CCCAATTGGA AGCTTTGATG GTGCTAACTG TTATGTGATG ACTAAGCCTG CGACAGGTTT TATCTACGCC AATAATTTCT ACTCTGAATA TAATGCTTGC TCTATTGGTA GTGATGATTC AGCTAACTGC TATATTGCAT CAGCGCCCGC GGGGACAACA GCCTTTATCT ATGCAGGTAA CTTCTATACC ACGCCAACGG GAGTGGCATC TTGCCCATCA AACAGTGTTT ATGATGGTGC TAACTGCTTT ATCGCGACAG CGCCAAATGG TTCAAGCCCC TTTATCTGGG GAGGAAACTT CTATTACGCA GACTAA
|
Protein sequence | MKLKSYYLLA STLAMVASNP TLADESKGAV SSNFKVSEEQ RPEAELKMFK LSLDDNWLGE SSAHRGVLSG KALSQEEVME LLQREGRLHP SKMTVALDDG EARDIGRFQS ELTADGVMLS EINQQLQRAK YQWEACLETE LAEGAFTFCI SSPLIPNRYL IQLDRRIDTK ELANVASELT SSVNGRLDYL YDSVFHGFSG VIDKEGLARL ENESMVIDIQ RDNLVHLHTI QNPVPSWGMD RIDERPLNLD SRFTYQENGA GVDVYVIDSG LRASHLDFSG RVGTGASFVG GSPNTDCIGH GTHVAGTTLG TRHGLAKGAT VHPVRVFGCT GSSTTATIVA GVNWVTANAG GTGVANMSLG GGGSTAIDSA VQTSINSGVT YVVSAGNSNA NACGFSPARV NDAITVGSTT DQDKRSSFSN KGSCVDIFAP GSDITSAWIG SNTATNTISG TSMSAPHVTG IAALLLAQNP AATPADIMSQ VIGDATSGVL SSIGSGSPDL LAFWKQPCTD PVIAHDGSVI TPWFDSQNCY VTPVPSGHNA FIWSGKYYVE PSFTDCPLGS YDGANCYVMT KPSTGFIYAN NFYHQYDACS VGSDDSANCY IASAAGGTTA FEWGGNFYTT PLPGNVCPIG SFDGANCYVM TKPATGFIYA NNFYSEYNAC SIGSDDSANC YIASAPAGTT AFIYAGNFYT TPTGVASCPS NSVYDGANCF IATAPNGSSP FIWGGNFYYA D
|
| |