| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2662 |
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| Symbol | |
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| ID | 6116961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3258519 |
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| End bp | 3260864 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634193 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001761033 |
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| Protein GI | 170727007 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0145895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATAAAAC AATCATTTGG AATAATAAGT GGAACCAGCG GTCTGATTTA TACTCTCAGC
CTTCCATTAC TATTCACTGC AACGGATGCA GCAGCAGACG ACTCACACTC ACCAGAAGTG
ATCACCGTTC TCGGTCAAGC CATTGATCAT GAAACACTAA CTTATCCTGG CGCCCAGCAA
CATGCGGATA TGGAGCAGAT TGAGCGAAGC CTAGATACCA ACATCGGTCA CTTTCTTAGA
GACAAGTTTG CAGGCGTCAG TGTTAATGAT GTACAAAATA ATCCTTTTCA GATGGATCTG
CAGTATCGTG GTTTTACCCT TTCACCTCTG CTCGGCTTAC CCCAAGGCAT GTCGGTCTAT
GTCAATGGCG TACGCTTTAA TGAGCCTTTC GGCGATACCA TCAACTGGGA GTTAATCCCA
CTATCAGCAC TCAATCAAGT TAGCCTCTAC TCAGGTTCAA ACCCGCTTTT TGGACAAAAT
ACCCTAGGCG GTGCCTTAGT ACTGGATCTC AAAGATGGCT TTACATTCCA AGGCACTTCG
CTAGAGCTCA GAGGTGGGAG CCATGGCATG GATCAACAAA CCCTAGAGAC TGGTGGCAAT
AATGGTGAGC TGGGTTATTA CGCAACTATC AGTCGTTATC AAGAAGACGG TTGGCGTCAA
TTTTCCCCCA CCGAAGTAAC ACAGTTTCTT GGCCGGCTCA GTTGGAAAGC CTCCGATAGA
TCCCGCTGGG ATCTACTCAC CGCTTTCAGC CAGAGTGATC TTATCGGTAA TGGCGCCGTT
CCCTTCGACT TAATGGCCTT AGAGGGCAGA GATGCGGTAT ATACTCACCC TGATAAGACA
GAGACTGATC ACAGCTTCGC TTCTCTATCG GGTAACCTCA AACTCAACGA TAATATGGCC
GTTGATCTGA ACCTCTACTA CCGTAACGGT CAAACCGACT CACTCAACGG AGATGACAGT
GACTTTGAGG AGTGTATGTA CTTGGGTGAA GAGACCCTTT GTGATGAGGA TGATGCGCCA
GTTCAATTTC TCAATCAAGA CGGTACTGCA TACCTAGGAA GTTTAGAGGA GCTAGGCTTA
GATGCAGACT CAATCGACGG GCTTAATAAC ACCTCAAAGA CAGATCAACA AGCGATGGGA
GCGGCCGCCC AGTTGACAAT TGACTCGCAA CTCAGCCAGA TGAGTGTGCA GTGGCTCTTG
GGAGCGGGTA TCGATTATGC TGATATTGAT TTCCAATCAG ATACAGAGTT TGCAGAACTG
CTCAATGATA CTGCCAGCTC TCCCCGTGCA ACCAAGGCCA TCGGCTTGTT TGATGCTGAC
TCGGTGGTCA GGCTCGACAG TAAGCGCCGT CACTATTACG CTTTTATGGC CGCCAGTTTA
CAGTTACGGG AGGATTTAAC CCTAAATTCT GCACTTAGAT ATGACGCAAC CAATGTCCAT
ATGACAGATT TAGCGCCAGG TGATGATGGC AAAACCTTAG ATGGCGATCA TGATTTCAGT
AATCTTAGCC CCTCCGTTGG TATTCACTGG ACATCAAGTG CCGAAACTGC ACTGTTTGCT
TCTTACGGTC GCTCTGGCAG AGCACCTACT CCGGTAGAAC TAAGCTGCGC TGACCCTGAA
GCCCCCTGTA AACTCCCCAA TGGTTTTGTA TCCGATCCAC CATTAGAGCA GGTGATCACA
GATACATTTG AGATAGGTGC AGAGTACAGC AGTAATGGCC TTTCATTGGG ACTAACCCTG
TTCCATGCCC GAAATCAGGA TGACATCATC TTTCAACAGG CATCGGGACT TCCATCAGAG
GGCTTCTTCG ACAATGTAGG CGATACTCAA CGTCAAGGAG GGGAGGTTTT CTATAAACAG
CAGTGGCAAG ATTGGCAGTT GGCTTTCTCT TACAGCTACC TAGATGCCAC CTTCCAGTCT
GATTATATCT CGTTCAGCCC CAATAACCCT TTGGGTGGAG ATAGGCTGGT CACCTCAGGG
GATGCGATAC CAGGTCTGCC TAAACATAAT GCGAAAGCAG GTCTTGAGTG GTATATCGGC
GATCTAACCC TAGGCAGTGA TATAAAGTAT CAAAGCGGCC AGTTTTATCG GGGCGATGAA
GCCAATGAAA ATGAGATGAT ATCGGGTTTT ACCTTGGTCG ATCTCAATGC GATATATCAG
ATTAACGATC ATATCTCTGT CTATGCCCGC ATCGACAATC TGTTTGATAC TGAATATGAA
ACCTTTGGCG CCTACGGTGA GTCCGATGAA GTGCTCGATA ATATCTACCC CGGATTTGAC
GATGCCAGAT TCGTAGGGCC CGGCGCCCCA AGAACCTATA TCGGTGGGGT TAAGGTTAAG
TTTTGA
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| Protein sequence | MIKQSFGIIS GTSGLIYTLS LPLLFTATDA AADDSHSPEV ITVLGQAIDH ETLTYPGAQQ
HADMEQIERS LDTNIGHFLR DKFAGVSVND VQNNPFQMDL QYRGFTLSPL LGLPQGMSVY
VNGVRFNEPF GDTINWELIP LSALNQVSLY SGSNPLFGQN TLGGALVLDL KDGFTFQGTS
LELRGGSHGM DQQTLETGGN NGELGYYATI SRYQEDGWRQ FSPTEVTQFL GRLSWKASDR
SRWDLLTAFS QSDLIGNGAV PFDLMALEGR DAVYTHPDKT ETDHSFASLS GNLKLNDNMA
VDLNLYYRNG QTDSLNGDDS DFEECMYLGE ETLCDEDDAP VQFLNQDGTA YLGSLEELGL
DADSIDGLNN TSKTDQQAMG AAAQLTIDSQ LSQMSVQWLL GAGIDYADID FQSDTEFAEL
LNDTASSPRA TKAIGLFDAD SVVRLDSKRR HYYAFMAASL QLREDLTLNS ALRYDATNVH
MTDLAPGDDG KTLDGDHDFS NLSPSVGIHW TSSAETALFA SYGRSGRAPT PVELSCADPE
APCKLPNGFV SDPPLEQVIT DTFEIGAEYS SNGLSLGLTL FHARNQDDII FQQASGLPSE
GFFDNVGDTQ RQGGEVFYKQ QWQDWQLAFS YSYLDATFQS DYISFSPNNP LGGDRLVTSG
DAIPGLPKHN AKAGLEWYIG DLTLGSDIKY QSGQFYRGDE ANENEMISGF TLVDLNAIYQ
INDHISVYAR IDNLFDTEYE TFGAYGESDE VLDNIYPGFD DARFVGPGAP RTYIGGVKVK
F
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