Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2645 |
Symbol | |
ID | 6116944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3241305 |
End bp | 3242264 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641634177 |
Product | integron integrase |
Protein accession | YP_001761017 |
Protein GI | 170726991 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02249] integron integrase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.400636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGCAAG CAACATACAT TGAGGCTATA CGTGCTGAGA TAAGGGTACG TCATTATAGC TATCAAACAG AAAAGTCTTA TCTTTATTGG AATCGATACT TTATAAGACA TTGCAATATT CGTCATGGTG ATGATATTAC GCCAGCTTTG ATTGAACATT TTCTGTGTTT TTTAGCTGTA CAATGCAAAG TGTCGGCTAG CACTCAGAAA CAAGCTTTGT GCGCGATTAT ATTTGCTTGT CGCCACGTAT TGAAAATAGA GACTAAAGAG CTGCAATTTC CCTATGCAAA AACTCCGCAA CGGATACCAC AGGTACTTTC TAGCGATGAA GCAAAACTGA TTATCAGTTT CTTATCAAAT TATCATCATC TAATCGGTTC TATACTATTT GGAGCGGGAT TAAGGCTAAA AGAGGCATTA AGACTCAGAA TAAAAGATAT TGATTTAAGC ACGAAGTCTA TCTTTGTCTA CCAAGGAAAA GGGCAAAAAG ATCGAGTTTG TATGCTACCT AATGGCTTGG TCGATGAGTT AACATTACAA ATGTCACATG TTAAAAAGAT ACATGATAGG GATCTTGTTG AAGGTTTTGG TTTAGCTTCT TTGCCCATAT CTCTTATCAA AAAGTATCGT AGCAGTGCCG CTAAATTTCA CTGGCAGTAT ATCTTCCCTG CGAGTCGCCG CTGTATACAT CCAAGCGATG AATATACGTG CCGACATCAT ATTCATCCTA CTGCATTTTC AAGAGAATTG AGAAAAGCGA CTACCAAGAG TAATACCAAT AAGCGCGTTA CTGCGCACAC TTTTCGTCAT TCATTTGCTA CATCATTATT ACTTAAAGGT CATGATATTC GTACTATTCA AGAACTATTA GGTCATAGTG ATGTCAAGAC TACCCAAATA TACACTCATG TTATTGGCGG GCATCATACT GGTGTGATAA GTCCTCTAGA CAATTTATAA
|
Protein sequence | MGQATYIEAI RAEIRVRHYS YQTEKSYLYW NRYFIRHCNI RHGDDITPAL IEHFLCFLAV QCKVSASTQK QALCAIIFAC RHVLKIETKE LQFPYAKTPQ RIPQVLSSDE AKLIISFLSN YHHLIGSILF GAGLRLKEAL RLRIKDIDLS TKSIFVYQGK GQKDRVCMLP NGLVDELTLQ MSHVKKIHDR DLVEGFGLAS LPISLIKKYR SSAAKFHWQY IFPASRRCIH PSDEYTCRHH IHPTAFSREL RKATTKSNTN KRVTAHTFRH SFATSLLLKG HDIRTIQELL GHSDVKTTQI YTHVIGGHHT GVISPLDNL
|
| |