Gene Swoo_2641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2641 
Symbol 
ID6116940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3231271 
End bp3234843 
Gene Length3573 bp 
Protein Length1190 aa 
Translation table11 
GC content49% 
IMG OID641634173 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_001761013 
Protein GI170726987 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.144342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTATC TTGTTCAATC GAATCGAATG GAAGCCCTTT CTGCTCAACT GGCGCAGGAG 
TTACAAACCC CCATTCCCGG TATGCCATTA CTGATGCCGG AGCAGATATT GGTACAGAGC
CCAGGGATGT CCACTTGGTT AAGGCTTGAG ATCGCCAGCA AGAACAAGAT AGCTGCCGCA
TTGGAGTTTC CTCTGCCTTC GAGCTTTATT TGGCAACTTT GCCACATTTT ACTGCCCGAT
GTACCTAAGG AAAACGCCTT CACCAAACCT TCGATGACCT GGAAATTGAT GGAGTTGCTA
CCCGAGCTGC TCGATATTGA AGAGTTTGCT CCCCTTAAAA ACTATCTCAA TCCCAACCTA
AACTCAGTTT CTGAGCAGAG CTCTGATAAT GAGCTAGATG AGAGGCCTGA AGAGCCACTC
AAGCTGTTTC AGCTTTGCGG CCAGATAGCG GATATCTTCG ATCAATACTT GGTATATCGC
CCCGACTGGA TAGCTGCTTG GGAGGCCAGC GAGCCCACAT TACCACCAAA AGGTGAAAAA
CTCGCGCCAG CTCAAGCTTG GCAACCTATA TTGTGGCGCG CGCTTATCAA GTTTAATAAC
GAGCGATTGA ACAAGAGCCG CTACCACAGA GCCAACCTAC ACCAATCTCT GTTTGATGCC
CTTGATGATC CCAACACCTC CCTTGAAGGC TTACCAAGAC GCTTATTCGT ATTTGGGATC
TCCTCCATGG CGCCACAAAC CTTAGATGTG CTCTATCATC TGGCCAAGCG CATCGATGTG
ATCATGTTGA ATTTAAGTCC CTGTCAACAC TACTGGGGCG ATATTATCGA TCCACGCCTG
CGTGCTCGTA TGGCGCTGGA GTACGCCAAT AAACATAAAC TCGAAGCCCA GTGGGAAGAT
AAACTTGAAG TGGGTAATCC CCTGCTTGCC AATAATGGCA AGATGGGACG TGAACTGCTG
GATCTGATTT TAGAACTCCC CGAGGAGCAC ACCAACTTTA ACTTCGAATG TTATCAAGAC
CCAGGGGTTA AAAACCTACT TCAAGGTGTA CAGCGAGACA TTCTTGAGCT TGAAACCAGA
GGCAGAAGCT TAGGCCCTGA TGCCTCACTG TATCTAACCC TCGATGGACG CCGTCCACTG
ACAATCGATG ATGACTCGCT GACGTTAAGA AGCTGTCATA GTCCACTACG AGAGATTGAA
ACTCTGCACG ATCATCTGCT GGAGATGCTC TCACGGGAAC CTGTCGATCC CAATGATCCT
TTGCTTGCCA AAGATATCGT TATCATGCTG CCAGATGTAG CAGCCTACGC CCCCTATATC
GACGCTGTTT TCTCGGCCAA ACAGGGCGCT CACTATATCC CCTACGCCAT TGCCGACCGA
GGTGCAGCGC AGGAATCACC GCTGATCAAC AGCTTTCTTA ATATCCTCGC CATCAACCAG
AGCCGCTTCG CCCTCACTGA CATCTTAGGG ATTTTAGAGG TACCTGCAGT ACTCAGGCGA
TTCGAGCTCG ATGATGATGA CTTGATGATG ATACGCCAGT GGCTAGAGCA AGCTGGCGTG
CGTTGGGGAC GAGATGAAAC CAGCAGAGCG GCACAGTCTC TGCCAGCATT CGATAAAAAC
TCCTGGGCAT TTGGCATTAA ACGTCTCATT TTAGGCTACG CATTTAGCGA TGATGCGCCG
CTCTATCACG ACACCTTAAC CGTTATGGGG ATCGAGGGGC AGTCGGCTCA AGCATTAGGC
AAGCTACTCA ACTTCATCGA AGCCTTAGAT GAATACCGTC TACAACTTGG CCAAACATGT
GAAATTGAAG TGCGTATGGC CCAGCTCAAT CAGCTACTGG ATGATTTTTA TGAGGTGGAT
GATGAAGAGC GCATGCAGCT ACAAGCTATA CGTGAAGCGA TCAGCAAATT AAAAACTGAG
CTGTCTGATG CAGGTCAAAT CACGCCGCTA AACACGCAAG TACTGCAAAA CTGGTTTAAC
AGCACCCTGA GTGAGTCTCG TGTCGGCCAA CGATATCTGG CCGGTAGCGT TAACTTCTGC
ACCTTAATGC CGATGCGATC CATTCCTTTT AAGGTGGTGT GTTTAGTTGG CATGAACGAT
GGTATCTATC CTAGGGTTCA GCACCCAGTA GGCTTTGATC TGGTGGCGCA GTTTGGCCCA
CGCAAAGGCG ACCGTTCACG CCGTTTAGAT GACAGATACC TATTTTTAGA AGCGATACTC
TCAGCCCGTG AGCAACTTTA TATCAGCTAT ATTGGCCACA GTGAGCGCGA TAACTCCGAG
CGGATCCCCT CAATGCTGGT CTCTGAACTG GTTGAGTATT GCCAGCTCTG TTACCTGCCA
GAGACATTCA ACAAACTCGA CTCGAGTGAT GCTGAAACCG TTATCAAGGT GATCCCTGCT
ATTGAAAAGG CAGTTCACCA GCAGTTGTTA ATTGAGCAGC CACTGCAACC TTTCGATGAG
CGCCTTTATG TAAGTCCGGC CTCAGAGATT GACGGCGCAA TTCAACTCAA ACAGAGCTAC
TCGGCCCAGT GGTGCCCGAC CAAAGCTGCA GGCCAATCAG CAGATGGTCT CGAACGTACT
CCACGGTTTA TTGATAATGG GGTTACTATC ACCCAAGCTA CAGAACTGGC CGACAGTCTA
GATAGCCAGG AGCTAGAGAT CTCGGCGCTT ATCCGTTTTT TCAGAAATCC AGCCCAATAC
TTTTTCAATC GCACTCTTAA GGTCGACTTG GGGCTTAATA TTCAAGCTGA CGATAACGAT
GAGCCCTTTA ATCTCAATGC CTTAGAGCGT TATAAGCTAC AAGCTAATCT ACTCGATAAC
GCGATTGAGC AAAAACTGGA AGCCCCAGAC GAAACGCTAT TACAGCGACT CAAAGCCGGT
GGTGAGCTGC CACTCGCCCC CTTTGACGAC CTACTTCTGG GCAATTATCT GCACGACATT
AAGCCCTTAA TTGGCCGCGC TCTATATCTG CAGGGAGAGA ATCAAAAATC ACTGGATATC
GACCTTGCCT TTACTGCCCA AGATGGCCTC AATGAAGCCA TCACACTGGT CGGACGCATT
GACGACCTCT GTGCTAAGGG CTTAGTGAAC TACCGACCCG GTACCGCCAA CGGCCGTGAT
TTAATTCGCG TCTACCTAAG GCATTTGTGT ATCTGCGCCA TGGGAGAGAA TAAACAGCAT
ACCAGCTATC TACTGGATAT CGGCCACTTC CATGCATTTC ACGGCGTCAC CCCAGAGCAA
GCACGGGCGC AGCTAAGCCT TTGGTTAAGT CTGTTTCAAT CAGGACAACT GCATCCATTA
ATGTTTATGC CCAGAACCGC CCTCGCCTAC GTTGAAGCCG AAGGGGAACA TGCAGATAAA
CTTATCGAGG CTCAAAGTCA GTGGATAGAT GAGCAGAGTC AATTAGGTGA AGGGTTTGAG
CCTCACTATC AGCGGCTCTT TAGTTTTCCT GAAGACTTTA CAGAAGTACA ATTTGGACTC
ACTGCCATGA CGCTCCTCTC TCCCATGCTC AGCCTTTATC ACAAAGACAG GCTGAGTGAA
CTCACTGCTT TTGTCGAAGG GGGAGCACAG TAA
 
Protein sequence
MLYLVQSNRM EALSAQLAQE LQTPIPGMPL LMPEQILVQS PGMSTWLRLE IASKNKIAAA 
LEFPLPSSFI WQLCHILLPD VPKENAFTKP SMTWKLMELL PELLDIEEFA PLKNYLNPNL
NSVSEQSSDN ELDERPEEPL KLFQLCGQIA DIFDQYLVYR PDWIAAWEAS EPTLPPKGEK
LAPAQAWQPI LWRALIKFNN ERLNKSRYHR ANLHQSLFDA LDDPNTSLEG LPRRLFVFGI
SSMAPQTLDV LYHLAKRIDV IMLNLSPCQH YWGDIIDPRL RARMALEYAN KHKLEAQWED
KLEVGNPLLA NNGKMGRELL DLILELPEEH TNFNFECYQD PGVKNLLQGV QRDILELETR
GRSLGPDASL YLTLDGRRPL TIDDDSLTLR SCHSPLREIE TLHDHLLEML SREPVDPNDP
LLAKDIVIML PDVAAYAPYI DAVFSAKQGA HYIPYAIADR GAAQESPLIN SFLNILAINQ
SRFALTDILG ILEVPAVLRR FELDDDDLMM IRQWLEQAGV RWGRDETSRA AQSLPAFDKN
SWAFGIKRLI LGYAFSDDAP LYHDTLTVMG IEGQSAQALG KLLNFIEALD EYRLQLGQTC
EIEVRMAQLN QLLDDFYEVD DEERMQLQAI REAISKLKTE LSDAGQITPL NTQVLQNWFN
STLSESRVGQ RYLAGSVNFC TLMPMRSIPF KVVCLVGMND GIYPRVQHPV GFDLVAQFGP
RKGDRSRRLD DRYLFLEAIL SAREQLYISY IGHSERDNSE RIPSMLVSEL VEYCQLCYLP
ETFNKLDSSD AETVIKVIPA IEKAVHQQLL IEQPLQPFDE RLYVSPASEI DGAIQLKQSY
SAQWCPTKAA GQSADGLERT PRFIDNGVTI TQATELADSL DSQELEISAL IRFFRNPAQY
FFNRTLKVDL GLNIQADDND EPFNLNALER YKLQANLLDN AIEQKLEAPD ETLLQRLKAG
GELPLAPFDD LLLGNYLHDI KPLIGRALYL QGENQKSLDI DLAFTAQDGL NEAITLVGRI
DDLCAKGLVN YRPGTANGRD LIRVYLRHLC ICAMGENKQH TSYLLDIGHF HAFHGVTPEQ
ARAQLSLWLS LFQSGQLHPL MFMPRTALAY VEAEGEHADK LIEAQSQWID EQSQLGEGFE
PHYQRLFSFP EDFTEVQFGL TAMTLLSPML SLYHKDRLSE LTAFVEGGAQ