| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2637 |
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| Symbol | |
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| ID | 6116936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3227738 |
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| End bp | 3228379 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634169 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001761009 |
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| Protein GI | 170726983 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0573022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0404034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGAG CACAAATACT ACTGGTTGAT GATCACCCTA CCCTCAGGCA AGGACTAGCT
CAACTTATCT CACTTGAAGA TAACCTAGAT GTCATCGCCC AAGCAGGCTC AGGAGATGAA
GCCATCAGCC TCGCCATTAA ACACGCACCG GATCTGATTT TACTGGATCT GAATATGAAG
GGCTTAAGTG GCATCGACAC CTTAATTGCA CTAAAACGTG CAGAGATAGA CAGCAAAATC
GTCATCTTCA CCGTATCCGA CAGTGAGAGC GACGTGCTTC AAGCTATCAA GTTCAACACT
GACGGTTACC TGCTAAAAGA TTCCGAACCC GAAGAGCTTA TCGAGAAAAT CAATCTGGCG
ATTCAAGGGG AGTTTGTGAT CAGCGCTCCA CTTACCAAAA TTTTAGCCAG ATCTCTCAGG
CCCGAAAGTA AAGCCTCCTC TCCCCTTGAA AACCTGACTC AGAGAGAGCT GCAGAACCTA
AAGTTAATCG CCTCAGGTAA GAGCAATAAA GATATCGCCA ACACCTTAGG GATTGCAGAA
ACTACAGTAA AAGTACACGT GAAAAACCTG CTGAAAAAAT TAGGCTTAAA GAGTCGCGTC
GAAGCAGCTG TATGGGCGGT AGAGCATAAG ATTGGCCACT AA
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| Protein sequence | MTRAQILLVD DHPTLRQGLA QLISLEDNLD VIAQAGSGDE AISLAIKHAP DLILLDLNMK
GLSGIDTLIA LKRAEIDSKI VIFTVSDSES DVLQAIKFNT DGYLLKDSEP EELIEKINLA
IQGEFVISAP LTKILARSLR PESKASSPLE NLTQRELQNL KLIASGKSNK DIANTLGIAE
TTVKVHVKNL LKKLGLKSRV EAAVWAVEHK IGH
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