| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2636 |
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| Symbol | |
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| ID | 6116935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3225956 |
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| End bp | 3227707 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634168 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001761008 |
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| Protein GI | 170726982 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0761488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0281081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGAC AGCAATTTAA CGATAAGATT GGCTCTATTG ACGATCAATT AAGTAGCTCC
TCTCTGGTTG CCAGAGCGGG ACAATTTATG GCGGTGATCA TCACCTTGGG CCTTATCAGT
ATGATCTCCT CCATCCTAGT CACTGAGAGT CTCAGTGGTG ATGCCGAGCA GATAAATCAG
GCTGGTGCCC TGCGTATGCA AGCAATACGT GTATCCAGAG CTAATTTGCT AGTTCAAGAT
GACTCTAAGC CCCTTGTCAC CAAAGAGATG CAGATTTTTG AGGACAAACT TTCTCAGCTT
TTTTTCGGTG GCATTACCAG TACAATCGAC AACCCACAAA TACTGGCCCA ACATAAAAAG
ATTGTCGCCC TTTGGCAAAG TATAAAAGCC AATATTGAAT CGAGTACAGC TGAAGATTTT
GATCAATTTA CCTTAGTCAT CGACAAGCTT GTCAGTCTGC TCCAGATGGA GTCTGAGAAA
AAATTAACCC TACTCAGATT GATTCAGGGG ATCACCCTGC TCTCAACTCT CATTGTCACC
TCCTTCGTAT TGGTTCGTCT CAACCGCACC GTGATCTCCC CCCTAAAACA GCTAGTGCGC
GTCGCTTCTG AAGCGGGTAA GGGAAATTTC GACACTCGCG TCGACTACAT TGCAGATAAT
GAGCTGGGCG TACTCTCCCG TACAATTCAC AGAATGTCGA AGCAGTTAAA AACCACCTAT
CAAGAGTTTG AAGATCGTGT GGCCCAAAAG ACCCAAGAGT TAACCCAAAG TAATCAATCT
CTTGAAGTGC TCTATCTCGC CGCCAGAAGC CTATCCAATA GTGAATATCA TCAAATCGAT
CAGGAGATAA TTCAAGAACT TGAACAGGTA CTTGAGTTTG GAAAAGTGTC AATTGTGCTT
AGCGAAACCA GCATCAATGA ACTCATCATC TATAAAGCCA ACACTAATAT CATAGATCAT
AAAAACAGAG AGATTCATCA ATTCGTACTG GAAAAACAGG GCCACTTTTT CGGCGATATT
GTCTGGCAGA TCCCAAAAGA TAAAAACCCT GAAGCATGGC AGCGACAGTT ACTTCAAGCC
ATGGCAGATA TTGTGGCGAC CTCTATTGAT CTTGAGCGAA AAAAGAACAG TGAAAATCGA
CTACTCATTG CCGAAGAGCG TGCAGTGATA GCAAGAGAGC TCCATGACTC ACTGGCTCAG
TCACTCTCAT TTTTAAAAGT GCAGATGAGC TTGTTAACCC GAAAAATGCA AAAAGGACTG
CCCGAAGAGC AAGTAAACGA AACCATAGAT GATATCAAGC AGGGGCTTAA TAACGCCTAC
TTACAACTCA GAGAGTTACT CACCACCTTT AGACTTAAAC TCGATGATCC ATCACTGGAA
AATGCCCTGC AAGGCACTGT GGCAGAGTTT ATTGAAAAGT GCCAACATGA CATTGAACTC
AAATTTGAAC TTCCACAAAA CTACCTGTCA GCCAGCCAAG AGGTGCATGT GCTACAGATC
ATTCGAGAAA GTCTCTCCAA TGTTCATCGA CATGCACAGG CGACAGCAGC AGGTGTTCGA
CTATTTAAGG ACAATAACAA GATACATATC GATATTTGGG ATAATGGTAA AGGGATCTCG
GATAATCTTG AGCAGCAGGG CCACTTTGGC TTAGGGATCA TGAGGGAGCG GGCAAAGTCA
CTTAATGCAC AATTACATGT GCAAGCAAAC TCCCCCACAG GTACTCAGAT CACACTTGAA
TTCATCCATT AA
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| Protein sequence | MIRQQFNDKI GSIDDQLSSS SLVARAGQFM AVIITLGLIS MISSILVTES LSGDAEQINQ
AGALRMQAIR VSRANLLVQD DSKPLVTKEM QIFEDKLSQL FFGGITSTID NPQILAQHKK
IVALWQSIKA NIESSTAEDF DQFTLVIDKL VSLLQMESEK KLTLLRLIQG ITLLSTLIVT
SFVLVRLNRT VISPLKQLVR VASEAGKGNF DTRVDYIADN ELGVLSRTIH RMSKQLKTTY
QEFEDRVAQK TQELTQSNQS LEVLYLAARS LSNSEYHQID QEIIQELEQV LEFGKVSIVL
SETSINELII YKANTNIIDH KNREIHQFVL EKQGHFFGDI VWQIPKDKNP EAWQRQLLQA
MADIVATSID LERKKNSENR LLIAEERAVI ARELHDSLAQ SLSFLKVQMS LLTRKMQKGL
PEEQVNETID DIKQGLNNAY LQLRELLTTF RLKLDDPSLE NALQGTVAEF IEKCQHDIEL
KFELPQNYLS ASQEVHVLQI IRESLSNVHR HAQATAAGVR LFKDNNKIHI DIWDNGKGIS
DNLEQQGHFG LGIMRERAKS LNAQLHVQAN SPTGTQITLE FIH
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