| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2634 |
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| Symbol | |
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| ID | 6116933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3220045 |
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| End bp | 3223848 |
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| Gene Length | 3804 bp |
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| Protein Length | 1267 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634166 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_001761006 |
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| Protein GI | 170726980 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0254363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTGG TTGTTGTCTT AGGTCAATGG AGTAAAAAGA TGAGTAATTT TCTTGATCGC
TTACAGTTCT TAAAGAAGAA AACGGGCGAG TTTAGCGATG GTCACGGTGA AACCACCAAT
GAGAGTCGTG AGTGGGAAAA CAGTTATCGC CAACGCTGGC AACACGACAA GGTAGTGCGC
TCTACTCATG GAGTGAACTG TACTGGTTCC TGCTCATGGA AGATCTACGT TAAAAATGGA
CTTGTTACCT GGGAAACCCA GCAAACAGAT TACCCGAGAA CCCGTCCAGA TCTACCAAAC
CATGAGCCCC GCGGCTGTCC TCGCGGCGCC AGCTACTCTT GGTATCTCTA CAGTGCTAAC
CGTCTAAAGT ATCCTAAGGT TCGTAAACCT TTATTGAAGT TATGGCGCCA AGCAAGAGCA
AACCAAGATC CTGTCAATGC TTGGGCATCG ATTGTAGAGG ATAAGGCGAA AGCTGATTCA
TACAAGTCAA AGCGCGGCAT GGGGGGATTC GTTCGCTCTA GCTGGGATGA AGTTAATGAA
ATTATTGCAG CAGCCAACGT CTATACCACA AAGACATTTG GTCCAGATCG CGTTATTGGT
TTCTCGCCAA TTCCTGCTAT GTCTATGGTC TCATATGCTG CTGGTGCTCG TTATCTTTCT
CTTATCGGTG GTGTGTGTTT AAGTTTCTAT GATTGGTATT GTGACTTGCC GCCATCATCA
CCTATGACAT GGGGTGAGCA GACCGATGTG CCAGAGTCTG CCGATTGGTA TAACTCCAAC
TACATTATCG CTTGGGGCTC GAACGTGCCT CAAACCCGTA CTCCCGATGC TCATTTCTTT
ACTGAGGTGC GTTATAAAGG GGCTAAAACG GTTTCAATTA CCCCTGATTA TGCTGAGGTT
TCTAAGCTGA CCGATGAGTG GCTTAATCCT AAGCAGGGAT CTGATGCAGC CTTAGGCATG
GCTTTTGGCC ACGTGATCTT AAGAGAGTTT CACTTGGATA ATCCGAGTGA GTACTTCACC
AACTATGTGC GTCAGTACAC TGACTTTCCT ATGCTGGTGG TTCTTGAGAA GCATGATGAC
AACTCGCTTA AATCAACGCG ATTTTTGCGT GCATCAGATT TAGGCGAAAA CTTAGGTCAA
GAAAATAACC CTGAGTGGAA AACTATCGGT ATCGATGAAA ACTCAGATGA ATTTGTCTCG
CCAACTGGCT CTATCGGTTA TCGCTGGGGG GAGAAGGGCA AGTGGAACAT CAAGGAGCGG
GAAGGTAAAG AGGGCAAGGA GACAAAACTC CAGTTATCGC TGATTGGTGG TGATGTCTCA
GCGGTCTCTT TCCCGCACTT TGCGGCTGAT GACACTAATA AACATTGGGT CTCCTGTGAG
CATGATGATG TTCAGGTGAG AAATGTTCCA AGTCGTAAAG TGATGGCCGC AAACGGTGAA
GAGTTAACTG TTGCCACCGT TTATGATTTG ATGATGGCCA ACTATGGTCT TGATCGTGGA
TTGGGTGGTG GCGGTGTGGC CAGCAGTTAC GATCAGGATA TTCCCGGTAC GCCAGCTTGG
CAGGAGAAGA TCACTGGAGT TTCTCGTGAC AAGGTGATTA AAGTTGCCCG TGAGTTTGCT
GATACTGCAG ATAAGACAAA GGGTAAGGCG ATGATCATCG TCGGCGCAGC CATGAATCAC
TGGTATCACA TGGACATGAA CTACCGTGGC CTTATTAACA TGGTGATGAT GTGTGGCTGT
GTGGGTCAAT CTGGTGGCGG TTGGTCTCAC TATGTTGGAC AGGAAAAGCT GCGTCCGCAA
ACAGGTTGGC AGCCATTGGC ATTTGGTTTG GACTGGTCAC GTCCGCCACG TCAGATGAAC
GGTACCTCCT TCTTCTACAA CCACTCTTCG CAATGGCGCC ATGAGAAGGT CAGTATCCAT
GAGGTGTTAT CGCCCTTGGC TGACAAGTCT GAGTTTTCAG AGCATATGCT TGATTACAAC
ATTAAAGCTG AGCGTATGGG CTGGTTGCCT TCCGCCCCAC AACTGAATAT GAATCCGCTA
CATCTGGCTA AGCAAGCTAA AGAAGCGGGA ATGGACCCCA AAGATTATGC GGTTCAGCAG
TTAAAATCAG GTGAGTTGAA GTTTGCTTCT GAAGCGCCAG ACTCTCCAGA AAACTTCCCT
CGAAACATGT TTATCTGGCG CTCTAATCTG CTCGGCTCTT CAGGTAAAGG TCATGAATAT
ATGCTCAAGT ACCTATTGGG CGCTAAAAAT GGCGTAATGA ATGATGATTT AGGTAAACGA
GGAGGATTTA AGCCTGAAGA GGTGGAGTGG GTCGATGAGG GAGCTACTGG TAAGTTAGAT
CTGGTGACAA CACTGGATTT TCGTATGTCC TCTACCTGTA TGTTCTCAGA CATCATTCTG
CCGACCGCTT GTTGGTATGA AAAAGATGAT TTGAATACAT CGGACATGCA CCCCTTTATC
CATCCGTTAT CGACTGCGGT CGACCCCGCT TGGGAAGCCA AGTCTGACTT TGAGATCTAT
AAGGGGATAG CCAAAGCGTT CTCTGAGGTC AGTGTCGGGC ATTTAGGCAA GGAGACGGAT
TTAGTCACCG TGCCGATGTT ACATGATACC CCTGGCGAAT TGGCTCAGCC CTTTGATGTT
AAAGATTGGA AAAAAGGTGA GTGTGAGCTT ATTCCTGGTT TAACCGCCCC TAACATGGTG
GTGGTCGAGC GTGATTACCC AAATACCTAT AAGAAGTTCA CCTCCTTTGG CCCTGCATTA
GACAAGCTAG GTAATGGTGG TAAAGGGATT AACTGGAATA CTGATGATGA GATCTTGCTG
CTCGGAGATC TTAACCACCG CAATACCGAT GAGGGGATTA GTGAGGGACG TCCTATCATT
GAAACGGCAA TTGATGCAGC GGAAACCATT CTCACACTGG CACCTGAGAC AAACGGAGCC
GTGGCGGTAA AAGCCTGGGC GGCATTGAGT GAGTTTACCG GACTTGATCA TACCCATCTG
GCTAAGCCTA AGCAGGAGGA GAAGATACGT TTTCGCGATG TTCAGGCTCA ACCTCGTAAG
ATCATCTCAT CACCAACCTG GTCAGGGCTA GAGGATGAGC ACGTAAGTTA CACCGCAGGT
TACACCAATG TCCATGAGCA GATCCCGTGG CGAACCATCA CAGGGCGTCA GCAGTTCTAT
CAAGATCATA AGTGGATGCA GGCCTTTGGT GAGCAGTTTG TCTCCTATCG ACCTCCTATC
AATACGAAAA CCGTGGATCT GGTTAAAGGC ACTAAATCAA ACGGCAATAA AGAGGTGGTA
CTTAACTGGA TCACGCCACA TCAGAAGTGG GGTATTCACA GTACCTATTC AGATAATCTC
TTGATGCTGA CTTTGTCACG TGGCGGTCCA ATAATCTGGA TGAGTGAGAT AGATGCCAAA
GATGCTGGTA TCGAAGATAA CGACTGGATC GAGGTGTTCA ATGCCAACGG TGCTATCGCA
TGTCGTGCGG TAGTTTCACA ACGTGTAAAT CAAGGCATGG TGATGATGTA TCACGCACAG
GAGCGAATCG TGAATGTGCC GGGCAGTGAG ATGACGGGCA CTCGAGGTGG TCACCATAAC
TCAGTGACCC GAGTGGTGAT GAAACCGACG CATATGATTG GTGGTTATGC TCAACAGTCT
TGGGGCTTCA ACTATTACGG CACTGTGGGT TGTAACCGTG ATGAGTTTGT TGTGGTCAGA
AAAATGGACA AGGTCGACTG GCTAGAAGGG TCCGATAGCG ATGATCTACC ACGTCCTTTA
CCCACTAACC CAGATGAAGC TTAA
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| Protein sequence | MILVVVLGQW SKKMSNFLDR LQFLKKKTGE FSDGHGETTN ESREWENSYR QRWQHDKVVR
STHGVNCTGS CSWKIYVKNG LVTWETQQTD YPRTRPDLPN HEPRGCPRGA SYSWYLYSAN
RLKYPKVRKP LLKLWRQARA NQDPVNAWAS IVEDKAKADS YKSKRGMGGF VRSSWDEVNE
IIAAANVYTT KTFGPDRVIG FSPIPAMSMV SYAAGARYLS LIGGVCLSFY DWYCDLPPSS
PMTWGEQTDV PESADWYNSN YIIAWGSNVP QTRTPDAHFF TEVRYKGAKT VSITPDYAEV
SKLTDEWLNP KQGSDAALGM AFGHVILREF HLDNPSEYFT NYVRQYTDFP MLVVLEKHDD
NSLKSTRFLR ASDLGENLGQ ENNPEWKTIG IDENSDEFVS PTGSIGYRWG EKGKWNIKER
EGKEGKETKL QLSLIGGDVS AVSFPHFAAD DTNKHWVSCE HDDVQVRNVP SRKVMAANGE
ELTVATVYDL MMANYGLDRG LGGGGVASSY DQDIPGTPAW QEKITGVSRD KVIKVAREFA
DTADKTKGKA MIIVGAAMNH WYHMDMNYRG LINMVMMCGC VGQSGGGWSH YVGQEKLRPQ
TGWQPLAFGL DWSRPPRQMN GTSFFYNHSS QWRHEKVSIH EVLSPLADKS EFSEHMLDYN
IKAERMGWLP SAPQLNMNPL HLAKQAKEAG MDPKDYAVQQ LKSGELKFAS EAPDSPENFP
RNMFIWRSNL LGSSGKGHEY MLKYLLGAKN GVMNDDLGKR GGFKPEEVEW VDEGATGKLD
LVTTLDFRMS STCMFSDIIL PTACWYEKDD LNTSDMHPFI HPLSTAVDPA WEAKSDFEIY
KGIAKAFSEV SVGHLGKETD LVTVPMLHDT PGELAQPFDV KDWKKGECEL IPGLTAPNMV
VVERDYPNTY KKFTSFGPAL DKLGNGGKGI NWNTDDEILL LGDLNHRNTD EGISEGRPII
ETAIDAAETI LTLAPETNGA VAVKAWAALS EFTGLDHTHL AKPKQEEKIR FRDVQAQPRK
IISSPTWSGL EDEHVSYTAG YTNVHEQIPW RTITGRQQFY QDHKWMQAFG EQFVSYRPPI
NTKTVDLVKG TKSNGNKEVV LNWITPHQKW GIHSTYSDNL LMLTLSRGGP IIWMSEIDAK
DAGIEDNDWI EVFNANGAIA CRAVVSQRVN QGMVMMYHAQ ERIVNVPGSE MTGTRGGHHN
SVTRVVMKPT HMIGGYAQQS WGFNYYGTVG CNRDEFVVVR KMDKVDWLEG SDSDDLPRPL
PTNPDEA
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