| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2625 |
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| Symbol | |
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| ID | 6116924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3209141 |
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| End bp | 3211144 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634157 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001760997 |
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| Protein GI | 170726971 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.253988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.029419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATG AGCACAGCGA GATCATATCT CGGCACAGCT TGTTATGGTT GCTACTGGCA
AATGTAGCAA TACTGGTTCC TCTGTATGAG AAACTCACCC CATGGACAAT GGCCATATGC
GGGATCTGTC TACTATGGCG ACTGGGCATA TTTATCGGTA AAGTCGCCAA ACCGCCACGC
TATTTAGTCA CCTTCTTAGC CTTAGGCTCA GCCATCACCC TCGCTTTAAT TATCAGTAGC
ATAGGTTTAT TGAACGGGCT AATCAATCTA CTTGTTTTAG GCTATGCGCT GAAATACATA
GAGATGAGGA AAAGACGAGA TGTGAGAACG GTTGTCTTGG TAGGCTATTT TCTTATTGCC
CTTACCTTTA TCAATCAGCA ATCCATCATC TACACGTTAA TCTTGGGTCT TGTTACCACC
ATCAACACTT GTGTGCTGGT TAGTCTGTAC CATGAGGGCA ATAAGCTAAA AGAAACGGCT
TTAATGGGAA GTAAACTTAT CATACAAAGC CTACCTCTGG CCGCCCTACT TTTTATTGTG
CTCCCTAAAC TCCCTCCCCT GTGGATGGTG CCACAAAACG GCTCCGCAAC AACCGGGTTA
TCAGATGAAG TCAGTTTTGG GGATATTGAG AAGCTCACTC GTTCAGCAGC TCTGGCATTT
CGCGCCGAGT TTGATAGGTC TCCTCCCGCC AATCATCTTC TGTATTGGCG TGCGCTGGTT
ATGGAAGATT ATGATGGCAA AATTTGGACT CAACATAAGA GTATCAAACA TATAGAAAAA
GATGTTCAAT TTACCGTTTC AGGCAGAGTT CGTCCTTCAG GAAATCCCAC CAATTATAGC
GTTATCGCAG AGCCTAGCTA TCAAAACTGG TTATATGGAC TCGATGTCGC CTTTAGTGAT
GACAGTAACA TCAGTAATCT GCCCGATTAC CGCCTCTATG CAAAACGCTC TGTTGATCAG
CAATACCGCT ACCGAGTTCA ATCCTACCTC AAATCCCCTA TGAGTCCAGT TCTTGACAAT
AAGGTTAAGC GGATAAACCT TTCACTACCA GAAGCAAGCA ACTTGAAAAC CCAGGCCTTT
GCTAATCAAT TGCTGTTGAA GTACCCAGAT CCGCTTCAGA GACTAAATGC ACTAATGAAC
TACTTCAACC AGGAGGATTA CTTTTACACC CTCTCACCTC CTCGAGTCGG ACCACAACAG
ATTGACGATT TTCTTTTTGA AAACAAAGCT GGTTTTTGTG TTCATTACGC CAGTGCTTTT
ACCTTTATAG CCAGAAAAAC TGGCATTCCT GCCAGACTCG TCACAGGCTA TCAGGGCGGA
GAGTGGAACC AGCAGGCAGG CTACCTGAGT GTTTATCAGT ATATGGCTCA CGCTTGGACG
GAGGTTTGGC TAGAGGGTAA AGGCTGGGTT AGGTTTGATC CTACCGCGAT GATCGCACCT
CAGCGTGTAT TAGAGGGGTT CGATGCCATC TTTGAACCTG AATCAAGTTA TCTGTTGGAC
AGCCCCTTTA GTCCATTAAG GTTAAGAGAG TTTCCTCTAC TTAATAAACT AAGACTCTCT
TTAGCCAGCA TGGATTACTA CTGGAGCGTT TGGGTGCTCG GTTTCGATGC CAATAAACAG
CAACGTGTGC TTCAAAAGCT GCTAGGAGGG GTGACTAAAC AGAAGATGTC CCTGTTTATG
TTGATAGCAA TATCACTCAT CGGTCTCACC ATTGCTTATA GTGCTGGTCT ACTCACCTTT
CGTAAACGTG GCGAGCAATA CGCAACAAAA TACACACAGA TATGCAACAA GCTAAATAAT
AAAGGCCTAG AGAGAAGGCT AGATGAAGGG CCGCTTGATT ATGGTAAAAG GGTTGAATTA
GCCATGCCCG CTCTTGCTAA TGAGTTTGCA CTCTTCACCC AATATTACAT TGCACTAAAA
TACCAACCTC TTACCAAACA GGGTCAAAAA AAGATTTCTA AACTGTTTTT ACGTCTCTTT
AAACAGATCA GGAAAAAACT TTAA
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| Protein sequence | MSNEHSEIIS RHSLLWLLLA NVAILVPLYE KLTPWTMAIC GICLLWRLGI FIGKVAKPPR
YLVTFLALGS AITLALIISS IGLLNGLINL LVLGYALKYI EMRKRRDVRT VVLVGYFLIA
LTFINQQSII YTLILGLVTT INTCVLVSLY HEGNKLKETA LMGSKLIIQS LPLAALLFIV
LPKLPPLWMV PQNGSATTGL SDEVSFGDIE KLTRSAALAF RAEFDRSPPA NHLLYWRALV
MEDYDGKIWT QHKSIKHIEK DVQFTVSGRV RPSGNPTNYS VIAEPSYQNW LYGLDVAFSD
DSNISNLPDY RLYAKRSVDQ QYRYRVQSYL KSPMSPVLDN KVKRINLSLP EASNLKTQAF
ANQLLLKYPD PLQRLNALMN YFNQEDYFYT LSPPRVGPQQ IDDFLFENKA GFCVHYASAF
TFIARKTGIP ARLVTGYQGG EWNQQAGYLS VYQYMAHAWT EVWLEGKGWV RFDPTAMIAP
QRVLEGFDAI FEPESSYLLD SPFSPLRLRE FPLLNKLRLS LASMDYYWSV WVLGFDANKQ
QRVLQKLLGG VTKQKMSLFM LIAISLIGLT IAYSAGLLTF RKRGEQYATK YTQICNKLNN
KGLERRLDEG PLDYGKRVEL AMPALANEFA LFTQYYIALK YQPLTKQGQK KISKLFLRLF
KQIRKKL
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