| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2619 |
|---|
| Symbol | |
|---|
| ID | 6116918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3201420 |
|---|
| End bp | 3202436 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641634151 |
|---|
| Product | putative sulfite oxidase subunit YedY |
|---|
| Protein accession | YP_001760991 |
|---|
| Protein GI | 170726965 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0854128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.179498 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTTA TAAAAAGACC ATCTTGGGAC ACAGTTAAGA GTTCAGATAT CACCCCTGAA
TCTGTGTTTA ATGATAGACG AAATATAATC AAAGCCTTAG GTTTGGGGGC TATAGGAGCG
AGTATTCCTG GGCAGGTGCA GGCTGGTATT TTTGACCTGT TCGGTAAGAG CCAACCCAGT
ACACCTTTTA TTACTAGCCC GTTGGCATTT ACTGTCAATA AAGGTTTTGA GTCGAGTGAG
GCTAAAACCC CATTTTCAAA GGTTTCGACC CATAATAACT TTTACGAATT TGGTACGAGT
AAGTCTGATC CCGTGGAAAA TGCACAGGGG TTTAAGGTGG ATCCTTGGTC TCTGGTGATC
GATGGCGAGG TTGATAACCC CATAACATTA GGCTTTGAAG ATCTCACCAA GATGATGGCG
CTGGAAGAAC GCACTTACCG TTTACGCTGT GTCGAGGCCT GGTCTATGGT TGTTCCTTGG
GTGGGTTTTC CTTTGGCTGC ATTGCTAAAA AAAGCGGGAG TTAACAGCAG AGCAAAATAT
GTTGCTTTTG AGACTCTGTT TGATCCGGAT CAGATGCCTG GACAGAAAAG CCGTTTAATG
GGAGGGGGGA TCCATTATCC CTATGTTGAA GGTTTAACCT TAGCTGAAGC GATGAATGAT
CTATCTTTCT TAGCAGTCGG TTTATATGGA AAAAGCTTAC CACCTCAAAA TGGGGCGCCC
ATTAGATTAG TGGTTCCTTG GAAATATGGC TTTAAAAGCA TTAAATCTTT AGTTCGGATC
CGAGTCATGG ATAAGCGTCC ACCAACAAGT TGGAATCAAC TTGCTCCACA AGAGTATGGT
TTTTATGCCA ATGTTAATCC CGATGTTGAT CATCCGCGTT GGTCTCAAGC AACTGAAAGA
CGAATTGGTG AAGGAGGTTT ATTCTCTGCA ACACGAATTA AAACTCGTCC ATTTAATGGT
TATCAAGAAC AGGTCGCAGA TCTTTATCGA GATTTAGATT TAAGAAGAAA CTATTAA
|
|---|
| Protein sequence | MHFIKRPSWD TVKSSDITPE SVFNDRRNII KALGLGAIGA SIPGQVQAGI FDLFGKSQPS
TPFITSPLAF TVNKGFESSE AKTPFSKVST HNNFYEFGTS KSDPVENAQG FKVDPWSLVI
DGEVDNPITL GFEDLTKMMA LEERTYRLRC VEAWSMVVPW VGFPLAALLK KAGVNSRAKY
VAFETLFDPD QMPGQKSRLM GGGIHYPYVE GLTLAEAMND LSFLAVGLYG KSLPPQNGAP
IRLVVPWKYG FKSIKSLVRI RVMDKRPPTS WNQLAPQEYG FYANVNPDVD HPRWSQATER
RIGEGGLFSA TRIKTRPFNG YQEQVADLYR DLDLRRNY
|
|---|
| |