Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2611 |
Symbol | |
ID | 6116910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3192842 |
End bp | 3193633 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641634143 |
Product | hydroxyacylglutathione hydrolase |
Protein accession | YP_001760983 |
Protein GI | 170726957 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00328129 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.860285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAGTG AAACTGATTT AACCATCACC CCCATTCAAG CATTTAATGA TAACTACATA TGGGTTATCT CTAAATCTAG CTCACCTTTG GTTTATGTGG TCGATCCCGG TGATGCTAAT GTTGTTATAC ATTACCTTGA AACGAACCAG CTCACACTAG CAGGAATATT GATAACACAT CACCATAGTG ATCATACAGG CGGCATTAAG TCACTGATAG AGTACAGTGC AACTGACCTT GAAATATACG GACCATCGAG TGAGAACATT GCAGATATTA ATAATCCCAT TTCGACTCAA CCCCATATCA AGCTGCAAGC ATTAGAGTTA ACCGCAAGGG TTTATCAATT ACCCGGTCAC ACCCTTGGGC ATATTGCCTA CCACATTCAA GATGAACTGT TTTGTGGTGA TACGCTATTT AGTGGAGGAT GTGGTCGTTT ATTTGAAGGA ACAGCAAGTC AGCTACACCA CTCCCTAGAG TTGCTGGCAT CGCTAGAACA ACACACTCGC GTATACTGTG CCCATGAATA CACCTTATCA AACCTTAAGT TTGCTATTCG GGTCGAGCCC AATAACAGCC AATTAGCGCA CTACTATCAA GATTGCCAAA CTTTACGAGC TAACAAAAAG ATAACCTTAC CCTCAACGAT TAAAACCGAA AAAGAGATAA ACCCTTTTTT ACGTTGTCAC ATCCATGAAA TTGTTAATGC AGTTAATCAA CATTTCAATC AAAAACCTGT TGATACTGTT ACAACTTTTG GGCTTCTTAG GCAATGGAAA GACAAGGCTT AA
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Protein sequence | MPSETDLTIT PIQAFNDNYI WVISKSSSPL VYVVDPGDAN VVIHYLETNQ LTLAGILITH HHSDHTGGIK SLIEYSATDL EIYGPSSENI ADINNPISTQ PHIKLQALEL TARVYQLPGH TLGHIAYHIQ DELFCGDTLF SGGCGRLFEG TASQLHHSLE LLASLEQHTR VYCAHEYTLS NLKFAIRVEP NNSQLAHYYQ DCQTLRANKK ITLPSTIKTE KEINPFLRCH IHEIVNAVNQ HFNQKPVDTV TTFGLLRQWK DKA
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