Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2604 |
Symbol | fadE |
ID | 6116901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3183025 |
End bp | 3185472 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641634134 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001760976 |
Protein GI | 170726950 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.114401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTACCC TACTTTGGAC TCTTGCGATG CTTTTTGTGT TAGGTGCTTT AACCTACCTC AGAGTATCTC TGCTTACATC TAGTTTCATC GCCGCAATCG TCCTGACGAT CGGAACAGCA GCTGAAGCTG TTAGTCCCTT AACTTGGATT ATCTTTTTAG TTATCGCGTT GCCACTTAAC ATCAGCTCAT TTCGTAAAAA CTTCCTCACT AAGCCGATGC TCAAGATGTA TCGTGGCATC ATGCCTGAGA TGTCATCGAC CGAAAAGGAA GCCATCGAAG CGGGGACAAC TTGGTGGGAT GCCGACATTT TTGCAGGCAA ACCTGACTGG CAAAAGCTGC ATAACTATCC AGCAGCGCGC TTAACAGCTG AAGAGCAAGC ATTCCTTGAC GGACCAGTCG AAGAGGTCTG TAAGATGCTT AATCAACATC AAGTATCCCA TGAACTGGGA GATCTACCGC AGGAGATCTG GCAGTATCTA AAAGATCACG GCTTCTTTGC CATGATCATT AAAAAGAAAT ATGGCGGACT TGAATATTCA GCCTATGCTC AATCTCGCGT ATTACAGAAG CTTGCGGGCG TTAGCAGCGA GCTTGCATCA ACTGTCGGTG TTCCTAACTC TTTAGGCCCT GGAGAGCTAC TGCAACATTA CGGTACTCCA GCCCAACAAG ACCACTATCT CCCTAGACTA GCAAAAGGTT TAGAGGTTCC CTGTTTTGCA CTCACAAGCC CAGAAGCGGG CTCAGATGCA GGCGCTATTC CTGACTTTGG TATCGTGTGT AAAGGCCAGT GGGAAGGCGA AGAGGTGCTA GGGATGAAAC TGACCTGGAA CAAGCGTTAT ATCACGCTTG CGCCTGTTGC AACAGTGCTT GGCCTTGCAT TCAAGCTACA AGATCCCGAT AAGCTGTTGG GTGATAAAGA GGAGCTGGGG ATCACCTGTG CCCTAATACC AACTGATATT GATGGGGTTG AAACCGGTCG TCGTCACTTC CCTCTTAACT GTATGTTCCA AAATGGCCCC ACACGAGGCA ATGAGGTATT CGTACCGCTA AGCTTTATCA TAGGTGGACC AGAAATGGCT GGCCAAGGCT GGCGTATGCT GGTTGAGTGT TTATCTGTTG GACGCGGCAT CACCTTACCG TCAAACTCTG CAGGTGGAAT TAAAACAGCC GCAGTGGCTA CCGGCGCTTA CGCACGTATT CGTCGTCAAT TTAAGCTCCC TATCGGCAAG CTTGAAGGCA TCGAAGAGCC TATGGCAAGA ATTGGTGGTA ATGCTTACCT AATGGAAGCG GTCACCAGTT TAACGACCAC GGGTATCGAT CTGGGTGAAA AACCTTCAGT TATCTCAGCT ATCGTTAAAT TCCATCTTAC CGACAGAATG CAAAAATGTG TTATCGATGC CATGGACATC CACGGCGGCA AAGGCGTTTG TCTTGGCCCG AATAACTACT TAGGTAGAGG CTATCAGGCT GCACCTATTG CTATTACAGT TGAAGGCGCG AATATTCTGA CCCGCTCGAT GATCATCTAT GGCCAAGGTG CTATCCGCTG TCATCCATAT GTACTTGCAG AGATGGAATC AGCATTCGAT ACTGATGCAG AGAAAGGATT AAACGATTTT GATGCTGCGA TATTCGGTCA TATTGGATTC ACCGCCAGTA ACCTAGTGCG CAGCTTCTGG TTAGGGCTTA CCTCTAGCCG TTTCTCTAAC GCCCCATACT CAGATAAAAC AAAGCGTTAT TATCAACACA TGAATCGCTT TAGTGCCAAT CTAGCACTGC TATCAGACTT AGCAATGGCG ACTCTGGGTG GAGATCTCAA ACGAAAAGAG CGTATCTCGG CTCGATTAGG TGATCTACTA AGTCAGCTAT ACCTCTCATC TGCCACGCTA AAACGTTATC AAGATGAAGG CCGTCAAACA GAGGATCTTG CTCTAGTACA ATGGGCTGTT GAAGATTCAT TGTACAAGTT ACAAGACTCG TTAGATGACT TACTCGATAA CTTCCCTATG GGCTTAGGCC GCGTGCTTCG CGTTATTATG TTCCCGTTTG GTCGCCCTCT TAAGCGTCCA AGTGACATAC TAGATCATAA AGTGGCTAAG ATAATGCAAA CTCCTTGTGC TAGCCGAGAC CGACTAGCAA AAGGTCAGTT CTTAACCGCA TGTGAAAACA ACCCTGTCGG TATTCAAGAG CAAACCTTTA AAGACATTAT TGCTTGTGAG CCTCTACACG ATAAAGTGTG TAAAGCAGCG GGCAAACGCC TTCCCTTTAT CTGGTTAGAT AAAGTAGCAG CAGAAGGTAA GGCGCTTGGG ATTTTAAGTG AAGATGAGAT AAGCTTACTT GAACGTACAG AGATTGGGCG CATGAAATCA ATTAACGTTG ATGATTTTGA CCCTGATGAA CTTAAAGCCA TGGTTGTCGC AAAAACTAAG CATGAACAAG CAGCGTAA
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Protein sequence | MTTLLWTLAM LFVLGALTYL RVSLLTSSFI AAIVLTIGTA AEAVSPLTWI IFLVIALPLN ISSFRKNFLT KPMLKMYRGI MPEMSSTEKE AIEAGTTWWD ADIFAGKPDW QKLHNYPAAR LTAEEQAFLD GPVEEVCKML NQHQVSHELG DLPQEIWQYL KDHGFFAMII KKKYGGLEYS AYAQSRVLQK LAGVSSELAS TVGVPNSLGP GELLQHYGTP AQQDHYLPRL AKGLEVPCFA LTSPEAGSDA GAIPDFGIVC KGQWEGEEVL GMKLTWNKRY ITLAPVATVL GLAFKLQDPD KLLGDKEELG ITCALIPTDI DGVETGRRHF PLNCMFQNGP TRGNEVFVPL SFIIGGPEMA GQGWRMLVEC LSVGRGITLP SNSAGGIKTA AVATGAYARI RRQFKLPIGK LEGIEEPMAR IGGNAYLMEA VTSLTTTGID LGEKPSVISA IVKFHLTDRM QKCVIDAMDI HGGKGVCLGP NNYLGRGYQA APIAITVEGA NILTRSMIIY GQGAIRCHPY VLAEMESAFD TDAEKGLNDF DAAIFGHIGF TASNLVRSFW LGLTSSRFSN APYSDKTKRY YQHMNRFSAN LALLSDLAMA TLGGDLKRKE RISARLGDLL SQLYLSSATL KRYQDEGRQT EDLALVQWAV EDSLYKLQDS LDDLLDNFPM GLGRVLRVIM FPFGRPLKRP SDILDHKVAK IMQTPCASRD RLAKGQFLTA CENNPVGIQE QTFKDIIACE PLHDKVCKAA GKRLPFIWLD KVAAEGKALG ILSEDEISLL ERTEIGRMKS INVDDFDPDE LKAMVVAKTK HEQAA
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