| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2591 |
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| Symbol | |
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| ID | 6116888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3167029 |
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| End bp | 3168636 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634121 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001760963 |
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| Protein GI | 170726937 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0347459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACT CAACACTGAG TTCTTCAGTT AATAGGCCTG TAGTGTGGAC GATTGCAGGC
TCCGATAGTG GTGGCGGGGC AGGCATACAA GCTGATTTAT TAACCATGAA CGATCTAGGA
TGTCATTCTT GTAGTGTCAT CTCCTGTGTT ACTGCGCAAT CTTCTGTGGC CGTTAATTTG
GTTGAGGCTG TTTCCCCTCA AATGTTTCAG TCACAGCTTG ATACCTTGCT ACATGATCTG
CCACCTGTTG CGATAAAAAT TGGGCTGTTG GCAAATCAAA GTCAGGTTTT GATGTTAGCG
AGCTGGCTAA GGGAAACGTT AGCCGAGTAC TGTAAGCAAG CAGGTGTTGA GGTTAGTGTG
ATCCTCGACC CTGTGATGTT TGCTACCTGT GGCGATAATC TAAATTCAAG TTTAGATTTT
TCGCCATTTA AAAATTTACT CACCTTAATT ACGCCCAATA TTACCGAGCT AGCCGCGCTG
GTGGAGATAA AGGCTAAGCC TGATCCTGCA ATGAGTGAAG CAGAGTCATT TTTAGTCGAT
CAAGCTGATT GTGTATTGGC GGCTGAGCAA TTATCAGAGC AACTTAACTG CCATGTATTA
GCAAAAGGAG GCGATCTCGG ACCTACTTGG CTTAGGGATT GTGCTCAAGA TATTTTTGTC
TGTAGAGAGG CGAAAGGAAG CTCTATTTTT CATCAAGGAA GAACCTTTCT GCTATCTGGT
CCACGTATAA ACAGTGACAA TACCCATGGC AGTGGTTGCA CTTTAAGCTC AGCTATTGCC
AGTGTGATGG GACAAGGTTA TGTGCTTCAT GATGCGATCG TGGTAGCAAA AGCCTATGTT
ACAGCTGGGA TCGCAGCGAG TTTTCAACCA GGAAGTGGGG CTGGAACGCT CGCTCGTACT
TCTTGGCCAT CAGATCTGAC ACTCTACCCA AGTATCTCTG CATTGGACTC CGGCCCATCG
CTGCCAGATA GAATCAAATT TAAGCCAATT GTTGAGCGCT TGGGTCTTTA CCCTGTTGTT
GCTGATTTGA GGTTATTACA CTCCTTACTT GAAACGGGGG CTAAAACCAT TCAGCTCAGG
ATAAAAGAGG GATTGGCTGA TGATATTGAA CAGCAGATCT GCTCGGCGAT TCAGTTAGGT
CGAGATTATA AAGCCAAGCT GTTTATCAAC GATCATTGGC AACTTGCACT TAAGCATGGG
GCTTATGGAG TACACCTTGG GCAGGAAGAT CTTTACACGG CAGATTTGAC CAAGATAGCG
AGTGCGGGTA TCGCGTTAGG TGTGTCGAGT CATAGTTATT TTGAACTGCT ACTTGCTCAT
CAGATTGCTC CATCATATAT CGCTCTAGGA CATATATTTC CGACTACTAC AAAGGTGATG
CCATCTAAAC CTCAGGGTCT TAATAAACTC AGTCGATATG TTGAGCTGCT AGGCTCTCAT
TACCCTTTGG TCGCCATAGG TGGCATTGAT GAGTCGAAAC TTGAAGCGGT AAAGCACACG
AGAGTTCATG ACATTGCTGT GGTGAGGGCG ATCACTCAAG CTGGAGATCC AGCTGGTGCA
TTTAGGATGC TTGCTCAAAA GTGGGAGGTG TGTAATGCCA CTGTGTGA
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| Protein sequence | MANSTLSSSV NRPVVWTIAG SDSGGGAGIQ ADLLTMNDLG CHSCSVISCV TAQSSVAVNL
VEAVSPQMFQ SQLDTLLHDL PPVAIKIGLL ANQSQVLMLA SWLRETLAEY CKQAGVEVSV
ILDPVMFATC GDNLNSSLDF SPFKNLLTLI TPNITELAAL VEIKAKPDPA MSEAESFLVD
QADCVLAAEQ LSEQLNCHVL AKGGDLGPTW LRDCAQDIFV CREAKGSSIF HQGRTFLLSG
PRINSDNTHG SGCTLSSAIA SVMGQGYVLH DAIVVAKAYV TAGIAASFQP GSGAGTLART
SWPSDLTLYP SISALDSGPS LPDRIKFKPI VERLGLYPVV ADLRLLHSLL ETGAKTIQLR
IKEGLADDIE QQICSAIQLG RDYKAKLFIN DHWQLALKHG AYGVHLGQED LYTADLTKIA
SAGIALGVSS HSYFELLLAH QIAPSYIALG HIFPTTTKVM PSKPQGLNKL SRYVELLGSH
YPLVAIGGID ESKLEAVKHT RVHDIAVVRA ITQAGDPAGA FRMLAQKWEV CNATV
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