| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2587 |
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| Symbol | thiH |
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| ID | 6116884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3164124 |
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| End bp | 3165233 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634117 |
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| Product | thiamine biosynthesis protein ThiH |
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| Protein accession | YP_001760959 |
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| Protein GI | 170726933 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.914294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0149307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTTC TTAGTTATTT ACAAGGGCTA TCACGTGAAA AGTTATCTCT AAAACTTTAC
TCATGCACGG GGAAAGATGT TGAGCAGGCG TTGCAGCATC CGGAAGGTTC CTTAGAGAGC
CTACTGGCGC TTTTATCTCC AGCTGCAGAG CCTTATCTGG AACAGATGGC GCAAACCTCC
GCACGTCTCA CTCGCCAACG TTTTGGGGCG AATATTGGTA TGTATTTGCC GCTATACCTC
TCTAACCTGT GTGCGAATGA GTGTGATTAT TGTGGCTTTA GCATGAGCAA TCGCATTAAG
CGTAAGACCT TGAGTCTAGA TGAGTTAAAT GCTGAGATGC GAGTGGTAAA AGCGATGGAT
TATGACTCAA TATTGCTGGT TTCAGGTGAA CATGAAACTA AAGTTGGCAT TGATTACTTT
AGCTCAGTTC TGCCAAGCGT TAAAAGTCAG TTCAGTTATG TGGCGATGGA GGTTCAACCA
CTCAAAGAGG CTGAATATTC CCAGTTGGCA GGACTTGGGC TCGATGCCGT GATGATCTAT
CAGGAAACTT ACAACCCGCA AACCTATGCC GAGCACCACA CACGAGGAAA TAAACAAAAT
TTTGAGTATC GTCTCGAGAC TCCTGAAAGG GTGGCTAGAG CAGGTGTCGA TAAAATTGGT
TTAGGTGTAC TGCTTGGTTT AGATGACTGG CGTTTGGATG CACTGTTATT GGGCCACCAT
TTAACTTATC TTGAGTCTCA TTTTTGGCGA AGCCGCTACA GTGTATCGTT ACCGAGATTA
CGCCCCTGCA CAGGGGGGAT ATCACCTAAA GTAGAGCTAA CTGATAGAGG GTTGGTACAA
CTAATTTGCG CATTTCGACT CTTTAATCAT CAGCTTGAGA TCAGTCTATC GACTAGAGAG
TCGGCTGAGT TACGTAATAA TTTGTTCGGT TTAGGGGTGA CTCAGTTAAG CGCAGGCAGT
TCAACACAGC CCGGTGGCTA CTTATTGCCT GATACTCAGC TTGATCAGTT TGAGATAAGT
GATGAGCGTA CACCTGTTGA AGTTTGCGTG GCAATGAGAG ATAGGGGGTT TAATCCTGTT
TGGAAAGACT GGGAATCAGC TTGGGTATAG
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| Protein sequence | MSFLSYLQGL SREKLSLKLY SCTGKDVEQA LQHPEGSLES LLALLSPAAE PYLEQMAQTS
ARLTRQRFGA NIGMYLPLYL SNLCANECDY CGFSMSNRIK RKTLSLDELN AEMRVVKAMD
YDSILLVSGE HETKVGIDYF SSVLPSVKSQ FSYVAMEVQP LKEAEYSQLA GLGLDAVMIY
QETYNPQTYA EHHTRGNKQN FEYRLETPER VARAGVDKIG LGVLLGLDDW RLDALLLGHH
LTYLESHFWR SRYSVSLPRL RPCTGGISPK VELTDRGLVQ LICAFRLFNH QLEISLSTRE
SAELRNNLFG LGVTQLSAGS STQPGGYLLP DTQLDQFEIS DERTPVEVCV AMRDRGFNPV
WKDWESAWV
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