| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2580 |
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| Symbol | |
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| ID | 6116877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3156192 |
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| End bp | 3157706 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634110 |
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| Product | gonadoliberin III-related protein |
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| Protein accession | YP_001760952 |
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| Protein GI | 170726926 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00280281 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000893339 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACTCTA AAAAACCTTT TTACATACTG GTTGCCCTGC TATTTATATC AGGCATAGCC
GCAAGTGTAT TTCGCGGTAT CGAGCATAAT GTCCCTTTCC TACCTGGCAA ACAGGTCCAA
AGCTGGGCTG TCGATGCTAA AGTTAGCTTT CAAGGTATAG GTGAGCCTGC AGAGGTCTCC
TTCTCTCTTC CTAACGATCC TGCATTTGAA GTGCTTGTTG AGAATGCATC TTCACCTGGA
TATGGCCTGA CAATAAGCCA AGATAACCAG GACCAAGAAC GCCGCGCACT TTGGTCTGTA
CGCTCGGCAA CTGGACTGCA AAACCTTTAC TACAAAGTCA CACTGATCCC AACAGGGACA
ACACAAGTGA TAGCAGAGCA GGAGCCTACT GCACCTAAAG ACTTCATCTG GCCAGCAACA
GAGAAAGATG CAGCTGAGCA GGTGATTAGT AAAGTTTGGG CTAAAAGTGC GACTAACTTA
ACCTTTGCCC AACAACTCAA TAAGGCATTA AATGCTGCGG AAAGAACTCA AAACGTAGAG
CTGCTATTAA GCAGCAATAC CCCAACAAAG CTCTTCCTGC ATATGCTTCA CAGTAAAGGG
GTTCCAGCGC AGGAGGTCAG TGGCTTATAC CTTGAAGATC AGCGCCGTAG ACAACAATTA
AGTAGCTTTG TTGAAGTTTA CAATGATGGT GAGTGGATAC TGTTCGATCC ATCAAACGGT
ACTCAAGGCC GAAAAGACAA CTTACTACTT TGGGATCGCT CAGGGAAATC AACCTTAGAT
GTTACCGGCG GCGTTAACTC ACAAGTTAAC TTCTCCATGC TACAAGACAC ACGCTCAGCC
CTTGCCACCT CTTTGGATGT CATGAAAAAT CAAGGAGCAT TAGATTTCTC CTTGTATCAA
CTTCCACTTG AAGAGCAAAG CCTATTTAAA GGGATATTAT TGATCCCTAT TGGCGTGCTT
ATGGTCGTTT TTCTACGTGT TATCGTTGGA CTTAAAACCT CTGGCACTTT CATGCCAGTG
CTTATTGCCC TCGCATTTAT TCAAACAACA CTGCTCACAG GTTTAATTGG TTTCATTCTT
ATCGTAGCCT GTGGCTTGAT GATCCGCTCC TACTTGTCAC AGCTCAACTT ACTGCTTATT
TCACGAATAT CGGCAGTGAT CATTGTTGTT ATAGGCATCA TAGGCATATT TACTCTCCTG
TCCTACAAGT TTGGTTTGAG CGAAGGCTTA ACCATCACCT TCTTCCCGAT GATAATCTTA
GCTTGGACCA TTGAGAGAAT GTCTATCTTG TGGGAGGAGG AAGGTCCTAA AGAGGTACTT
TTACAAGGCG GAGGAAGCTT ATTTGTCGCA ACACTAGCCT ATCTGGCCAT GAGCGCAACT
TGGGTTCAGC ACTGGGTGTT TAACTTCCTT GGTATTCATC TTGTGATATT GGCGATTGTC
TTACTGATGG GACAGTATAC AGGTTACCGT TTACTCGAAC TTAGACGCTT TAAGCCATTG
GCAGGGGATA AGTAA
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| Protein sequence | MHSKKPFYIL VALLFISGIA ASVFRGIEHN VPFLPGKQVQ SWAVDAKVSF QGIGEPAEVS
FSLPNDPAFE VLVENASSPG YGLTISQDNQ DQERRALWSV RSATGLQNLY YKVTLIPTGT
TQVIAEQEPT APKDFIWPAT EKDAAEQVIS KVWAKSATNL TFAQQLNKAL NAAERTQNVE
LLLSSNTPTK LFLHMLHSKG VPAQEVSGLY LEDQRRRQQL SSFVEVYNDG EWILFDPSNG
TQGRKDNLLL WDRSGKSTLD VTGGVNSQVN FSMLQDTRSA LATSLDVMKN QGALDFSLYQ
LPLEEQSLFK GILLIPIGVL MVVFLRVIVG LKTSGTFMPV LIALAFIQTT LLTGLIGFIL
IVACGLMIRS YLSQLNLLLI SRISAVIIVV IGIIGIFTLL SYKFGLSEGL TITFFPMIIL
AWTIERMSIL WEEEGPKEVL LQGGGSLFVA TLAYLAMSAT WVQHWVFNFL GIHLVILAIV
LLMGQYTGYR LLELRRFKPL AGDK
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