Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2579 |
Symbol | |
ID | 6116876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3155435 |
End bp | 3156181 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641634109 |
Product | hypothetical protein |
Protein accession | YP_001760951 |
Protein GI | 170726925 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4067] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000115581 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000033287 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGTTTAAAC AGATAATCTG TATTGCGATA GCAGCGGGAC TAACCGGTTG TGCAGCGACA TCTCAGGAAA ACGCAAACTT ACCTAAACCA GTAGATGTTA CTGTGTTAGA CACAAGTTTA GCGCGACAAC AAGCAGATTT GATTCAGATC ATGGATGACA GTAACACCGC TCAATCAGCT GCAATTTCAG GACTATCAAA ACAGATTGTC TCTTTAGAGA AGAAGCTTTC AACACTTAAA CTATCACCTG AAGAAAAAGT TGTCCCAGTC GCGCTCGATT GTCCTCCCTC ACCTCTAGCC GGTAAGTTTC TTCTTGGTGC TATTGAAAAT GTCTTTGTTG AGGAGGTAAA AGCCAGTTTC AATACTCGTA TTGATACTGG TGCAGAGTCA TCATCCCTTG ATGCCCGTAA CATCATTCTA TTTGAACGTG ATGGAAAGCA ATGGGTTAGA TTTGATGTAT TTACATTAGG CGAAGATGCA CCAGCACAAA CCTTTGAATC AAAAGTAGAA CGCTTTGTCA GAATTAAGCA AGATTCAGAT GAAAAAACCG ATCGCCGACC TGTTATTCAC GCGCATCTGA AGATTGGCCA ATACTCGGCT GAGACGGATC TTAACTTAGT CGATCGCAGT CACTTAGATT TCCCGCTTCT ACTCGGTCGT AAATTTATGC AAGATATCGC TGTCGTTGAT GTAGGACAGA CCTATATTCA TGGCAAAAAG AAGCCAGCTG TAGAATCAGC TAAATAG
|
Protein sequence | MFKQIICIAI AAGLTGCAAT SQENANLPKP VDVTVLDTSL ARQQADLIQI MDDSNTAQSA AISGLSKQIV SLEKKLSTLK LSPEEKVVPV ALDCPPSPLA GKFLLGAIEN VFVEEVKASF NTRIDTGAES SSLDARNIIL FERDGKQWVR FDVFTLGEDA PAQTFESKVE RFVRIKQDSD EKTDRRPVIH AHLKIGQYSA ETDLNLVDRS HLDFPLLLGR KFMQDIAVVD VGQTYIHGKK KPAVESAK
|
| |