Gene Swoo_2579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2579 
Symbol 
ID6116876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3155435 
End bp3156181 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content42% 
IMG OID641634109 
Producthypothetical protein 
Protein accessionYP_001760951 
Protein GI170726925 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000115581 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000033287 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTTTAAAC AGATAATCTG TATTGCGATA GCAGCGGGAC TAACCGGTTG TGCAGCGACA 
TCTCAGGAAA ACGCAAACTT ACCTAAACCA GTAGATGTTA CTGTGTTAGA CACAAGTTTA
GCGCGACAAC AAGCAGATTT GATTCAGATC ATGGATGACA GTAACACCGC TCAATCAGCT
GCAATTTCAG GACTATCAAA ACAGATTGTC TCTTTAGAGA AGAAGCTTTC AACACTTAAA
CTATCACCTG AAGAAAAAGT TGTCCCAGTC GCGCTCGATT GTCCTCCCTC ACCTCTAGCC
GGTAAGTTTC TTCTTGGTGC TATTGAAAAT GTCTTTGTTG AGGAGGTAAA AGCCAGTTTC
AATACTCGTA TTGATACTGG TGCAGAGTCA TCATCCCTTG ATGCCCGTAA CATCATTCTA
TTTGAACGTG ATGGAAAGCA ATGGGTTAGA TTTGATGTAT TTACATTAGG CGAAGATGCA
CCAGCACAAA CCTTTGAATC AAAAGTAGAA CGCTTTGTCA GAATTAAGCA AGATTCAGAT
GAAAAAACCG ATCGCCGACC TGTTATTCAC GCGCATCTGA AGATTGGCCA ATACTCGGCT
GAGACGGATC TTAACTTAGT CGATCGCAGT CACTTAGATT TCCCGCTTCT ACTCGGTCGT
AAATTTATGC AAGATATCGC TGTCGTTGAT GTAGGACAGA CCTATATTCA TGGCAAAAAG
AAGCCAGCTG TAGAATCAGC TAAATAG
 
Protein sequence
MFKQIICIAI AAGLTGCAAT SQENANLPKP VDVTVLDTSL ARQQADLIQI MDDSNTAQSA 
AISGLSKQIV SLEKKLSTLK LSPEEKVVPV ALDCPPSPLA GKFLLGAIEN VFVEEVKASF
NTRIDTGAES SSLDARNIIL FERDGKQWVR FDVFTLGEDA PAQTFESKVE RFVRIKQDSD
EKTDRRPVIH AHLKIGQYSA ETDLNLVDRS HLDFPLLLGR KFMQDIAVVD VGQTYIHGKK
KPAVESAK