| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2575 |
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| Symbol | aspS |
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| ID | 6116872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3148619 |
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| End bp | 3150406 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634105 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001760947 |
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| Protein GI | 170726921 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000163507 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000702641 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAGTC AATATTGTGG AGACGTTAAT AAGTCTCACG TTGGACAAGA AGTAACCTTA
GTAGGTTGGG TAAACCGTAG TCGTGATTTA GGCGGGGTTG TTTTTCTTGA TCTACGTGAT
AGAGAAGGCA TAGTTCAGGT TGTTTATGAT CCTGACTTAC CTGAGGTGTT CGATGTCGCA
AGTACACTAC GCAGTGAATT TTGTGTTCAG GTAACCGGTT TAGTTCGTGC GCGTCCAGAT
AGTCAAGTTA ATCAGGATAT GCGTACCGGT GGGATTGAGA TCTTAGGTAA AGGCTTAACT
ATTCTAAACA GCTCAGCGCC TTTGCCGATT AACATGGATA AGAATCAGCA CAACACTGAA
GAGCAAAGAT TAAAATACCG TTATTTAGAT CTACGCCGCC CTGAGATGGC TGATCGTATT
GTATTTCGCT CTAAAGTGAC CAGTGCAGTT CGTCGTTTCC TTGATGACAG TGGCTTCCTA
GATATCGAAA CCCCTATTTT GACTAAGGCG ACACCTGAAG GTGCCCGTGA CTATCTAGTG
CCTAGCCGCA CATATAAAGG TCAATTTTTT GCGTTGCCAC AGTCACCACA ACTCTTTAAG
CAGTTGTTGA TGATGTCAGG CTTTGATCGT TACTATCAGA TTGTTAAGTG TTTCCGTGAT
GAAGACTTAC GTGCTGACCG TCAACCTGAA TTTACTCAGA TAGATATCGA AACTTCATTT
ATGTCATCTG AGCAAGTGAT GGCTAAAACT GAAGAGATGG TTCGCGGTCT CTTTAATGAC
CTATTAAATG TCGACTTAGG CGAATTCCCT AAGATGACTT TTGCAGAAGC GATGCGTCGT
TTTGGCTCAG ACAAGCCTGA TTTACGTAAC CCGCTAGAGC TGATTGATAT CGCAGATATC
GTTAAAGAGG TTGAGTTTGC AGTATTTAAT GGCCCTGCAA ACGATCCAGA AGGTCGCGTT
GCAGTACTAA GCATTCCTGG TGGCGCTAAA CTGTCACGTA AGCAGTTAGA TGAATACGCT
AAGTATGTGA CTATTTACGG TGCCAAAGGT CTGGCTTGGA TGAAGGTTAA TGATCTTGAC
CAAGGCATGG AAGGCATTCA GTCTCCAGTA CTAAAGTTCC TAAGCGAAGA CGTGGTTAAA
GCGTTACTTG ATCGTACTGG CGCACAAACA GGCGATCTAA TCCTATTTGG CGCAGATAAA
GCGAACATAG TTGCAGAAGC TATGGGCGCA CTTCGTCTTA AAGCTGGCGA AGACTTTGAC
TTACTACAAG GCGAGTGGAA ACCACTTTGG GTTGTTGATT TCCCTATGTT TGAAAGAACA
TCTGATGGCG GCTTACATGC AATGCATCAC CCGTTCACTG CGCCAACAGG CATCAGCCCT
GAGCAACTTG AAGCGGATCC AACTGCTGCT ATCTCTGATG CTTATGACAT GGTCCTAAAT
GGCTGTGAGC TAGGTGGTGG TTCTGTGCGT ATTCACAATA GTGAGATGCA ATCGGCAGTA
TTTCGTATCT TAGGTATCGA AGAGGAGGAA GCAAATGAGA AGTTTGGTTT CCTACTTGAA
GCGCTACGTT ATGGTACGCC TCCTCATGCG GGACTTGCTT TCGGGTTAGA TCGCATCATC
ATGTTGATGA CTGGGGCAAG CTCTATTCGT GATGTGATGG CATTTCCTAA GACCACCACA
GCAGCGTGTC CGCTTACCAA TGCGCCGGGG TTTGCAAATC CCGCACAACT CATTGAACTT
GGTATTGAGG TTATCGAAAA CCAAGAGAGT AAAGAAGAGC AAGCATAA
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| Protein sequence | MRSQYCGDVN KSHVGQEVTL VGWVNRSRDL GGVVFLDLRD REGIVQVVYD PDLPEVFDVA
STLRSEFCVQ VTGLVRARPD SQVNQDMRTG GIEILGKGLT ILNSSAPLPI NMDKNQHNTE
EQRLKYRYLD LRRPEMADRI VFRSKVTSAV RRFLDDSGFL DIETPILTKA TPEGARDYLV
PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF
MSSEQVMAKT EEMVRGLFND LLNVDLGEFP KMTFAEAMRR FGSDKPDLRN PLELIDIADI
VKEVEFAVFN GPANDPEGRV AVLSIPGGAK LSRKQLDEYA KYVTIYGAKG LAWMKVNDLD
QGMEGIQSPV LKFLSEDVVK ALLDRTGAQT GDLILFGADK ANIVAEAMGA LRLKAGEDFD
LLQGEWKPLW VVDFPMFERT SDGGLHAMHH PFTAPTGISP EQLEADPTAA ISDAYDMVLN
GCELGGGSVR IHNSEMQSAV FRILGIEEEE ANEKFGFLLE ALRYGTPPHA GLAFGLDRII
MLMTGASSIR DVMAFPKTTT AACPLTNAPG FANPAQLIEL GIEVIENQES KEEQA
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