Gene Swoo_2573 details

Gene Information

• Locus tag: Swoo_2573
• Symbol: ruvC
• ID: 6116870
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella woodyi ATCC 51908
• Kingdom: Bacteria
• Replicon accession: NC_010506
• Strand: -
• Start bp: 3147265
• End bp: 3147786
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641634103
• Product: Holliday junction resolvase
• Protein accession: YP_001760945
• Protein GI: 170726919
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00104649
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 6
• Fosmid unclonability p-value: 0.00130455
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCAATAA TTCTTGGTAT CGATCCCGGT TCAAGGATCA CAGGCTATGG TGTGATCCAG 
TGTAATGGTC GAAGCCAAAT CTATTTAGGA AGTGGTTGTA TTCGTACCGC TTCCGATGAT 
TTTCCTTATC GACTAAAGCA GATTTTTGAT GGCGTTTCTG AGATTATCCG TCAATATCAA 
CCCAATTTTT TCGCCATAGA GCGAGTCTTT TTAGCCAAAA ATGCCGACTC AGCACTTAAA 
TTAGGCCAAG CACGCGGCGC TGCAATTGTT GCCGCGACGA ATGCCGATCT TCCTGTTGCA 
GAGTATTCTG CAACCCAGAT AAAAAGTGCT GTTGTTGGAA CAGGAAAGGC TGAAAAAACG 
CAAGTACAAC ACATGGTTCA ACAGATCCTG AAACTCCCCG CGGCTCCACA AGCCGATGCT 
GCTGATGCAT TAGGCGTCGC CATCTGCCAT TTTCACACGA GCCAGAGCCT TGTCTCTTTG 
GGGGGAAGAG CTAATACCCG AACATATGGA CGTTATAGAT GA 

 

Protein sequence

MAIILGIDPG SRITGYGVIQ CNGRSQIYLG SGCIRTASDD FPYRLKQIFD GVSEIIRQYQ 
PNFFAIERVF LAKNADSALK LGQARGAAIV AATNADLPVA EYSATQIKSA VVGTGKAEKT 
QVQHMVQQIL KLPAAPQADA ADALGVAICH FHTSQSLVSL GGRANTRTYG RYR