| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2572 |
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| Symbol | ruvA |
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| ID | 6116869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3146651 |
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| End bp | 3147268 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634102 |
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| Product | Holliday junction DNA helicase RuvA |
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| Protein accession | YP_001760944 |
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| Protein GI | 170726918 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
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| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0232474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00151008 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATAGGTC GTTTACGCGG TGTGCTTGTT GAGAAACAAG CACCAGAGAT ATTGCTTGAA
GTGGCTGGTT TAGGATATGA AGTTCAGATG CCACTGACCA GTTTTTATGA GCTACCAGAT
CTCAATCAGG AAGCACAGAT ATATACCCAT TTTGTGGTGC GTGAAGATGC ACAACTGTTA
TACGGCTTTA TCACTAAGCA GGAGAGAGCA CTCTTTCGTC TGTTGATAAA AACCAATGGT
GTTGGCCCCA AATTAGGCTT GACTATTTTA TCAGGGATGA CGGCGGGTGA GTTTGTCGCT
TGTGTTGAGC GAGATGATAT TGCGACCTTA GTAAAATTGC CTGGTGTTGG GAAGAAAACC
GCAGAAAGGT TATTGGTTGA GATGCGTGAT AAGCTTAAAA GCTTACTGGA GACCTCGGCG
GGCAGTGAAC GTGAGTTTAT GCTTAAAAGC AACTATACAC CTGCGCCTGT GGTTAATACC
GCCGAAGAGG ATGCTATTGC TGCACTGTTA TCGTTAGGCT ATAAACCGGC GCAAGCGAGC
AAGGCTGTTT CTGCGGCATT CAAAGAGGGC ATGAGCTCTG AAGACTTGAT TAAGTCGTCA
CTTAAGTCAA TGTTATAA
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| Protein sequence | MIGRLRGVLV EKQAPEILLE VAGLGYEVQM PLTSFYELPD LNQEAQIYTH FVVREDAQLL
YGFITKQERA LFRLLIKTNG VGPKLGLTIL SGMTAGEFVA CVERDDIATL VKLPGVGKKT
AERLLVEMRD KLKSLLETSA GSEREFMLKS NYTPAPVVNT AEEDAIAALL SLGYKPAQAS
KAVSAAFKEG MSSEDLIKSS LKSML
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