Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2571 |
Symbol | ruvB |
ID | 6116868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3145616 |
End bp | 3146632 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641634101 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_001760943 |
Protein GI | 170726917 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.011868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00180359 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATAGAAG CAGATCGTTT AATTCACGCT GAGCCTCAAG GCATAGAGGA GCGTGATGAG CAGATTGATA GGGCGATGCG CCCTAAGATG CTTGATGAGT ATACTGGTCA AGATGACAGC CGTGCTCAAT TAAAAATATT TATTCAAGCG GCTCAAAACC GTGATGAAGC GCTTGATCAT ATGCTGATTT ATGGTCCGCC AGGTTTAGGT AAAACTACCT TGGCCATGAT TGTAGCTAAT GAGATGGGGG TTAATATAAA ATCAACCTCC GGTCCTGTAC TGGAAAAAGC AGGGGATTTG GCAGCCTTGC TGACTAACCT CGAACCTGGC GATGTGCTGT TTATTGATGA AATACACCGT CTGAGTTCTG TGGTTGAAGA GATCCTCTAT CCTGCCATGG AGGATTATCA GCTTGATATT ATGATAGGTG AAGGTCCTGC TGCACGTTCA ATAAAATTAG ATCTGCCTCC ATTTACGTTA ATTGGCGCAA CAACGCGAGC TGGGGCGTTA ACGTCCCCAT TAAGAGCAAG ATTTGGGATC CCACTGCGAT TAGAGTTTTA CAATGTCAAA GACTTGAGTT CAATTGTGAC CCGTTCAGCA AATGTACTTG AGCTACCTAT TGATGAAGCT GGTGCCATTG AGTTAGCAAG GCGTTCACGT GGTACTCCAA GGATCGCTAA CCGTTTATTA AGACGTGTAC GTGACTTTGC TGAGGTAAAA CATGATGGAG AGATAACCAA GCAGGTTGCC GAACTTGCTT TGGATATGCT TGATATTGAT TCAGAAGGGT TTGATTATAT GGATCGTAAA CTCCTTCTTG CCATCATAGA TAAATTTATG GGTGGACCAG TAGGCTTAGA TAATCTGGCT GCTGCGATTG GTGAAGAGCG TGAAACGATT GAAGATGTTT TAGAGCCTTT TTTGATCCAG CAGGGCTTTA TTCAACGAAC ACCAAGGGGA AGGATTGCTA CCGATCGTGC CTATCGGCAT TTTGATATCA TTCAACCAGA AAAATAG
|
Protein sequence | MIEADRLIHA EPQGIEERDE QIDRAMRPKM LDEYTGQDDS RAQLKIFIQA AQNRDEALDH MLIYGPPGLG KTTLAMIVAN EMGVNIKSTS GPVLEKAGDL AALLTNLEPG DVLFIDEIHR LSSVVEEILY PAMEDYQLDI MIGEGPAARS IKLDLPPFTL IGATTRAGAL TSPLRARFGI PLRLEFYNVK DLSSIVTRSA NVLELPIDEA GAIELARRSR GTPRIANRLL RRVRDFAEVK HDGEITKQVA ELALDMLDID SEGFDYMDRK LLLAIIDKFM GGPVGLDNLA AAIGEERETI EDVLEPFLIQ QGFIQRTPRG RIATDRAYRH FDIIQPEK
|
| |