Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2568 |
Symbol | |
ID | 6116865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3143091 |
End bp | 3143882 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641634098 |
Product | hypothetical protein |
Protein accession | YP_001760940 |
Protein GI | 170726914 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00527973 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAT TTTTTTTGAG CTATTTTATA GCTTCACTTT TTAGTTCTGC GGCTTATGCC AACCTTCTTG TGACGCCAAC TCGTGTAGAG TTAGATAATA AAGCGCAGCG TAGTGCTGTA TTTTCGTTAG TTAACAAAGG CAAGCAAGAC GCCAGATATA ATATCTACTT TGAAGATAAA AAGTTACTTC CAACAGGGGA TTATGTCTCT TTGGAAAACT CATCTACCTC TTTAGCTAAA TTTGTTCGTT ACTCTCCTAG GCGCGTGAGT TTGGCCCCTG AGGAGGGGAC GAGAGTCAGG ATGGCTTTAA GGTTACCTAA AGGTACCCCA GAAGGTGAGT ACCGAAGTTA TATTGTCTTT CATCAGATCC CATTAGCACC AACAGCTATC GATAATGAAC AAAAAAATAC CAGCAATACC TTGAGTTTAT CGGTAACAGC TTATATGCGG ATCTCTATTC CAGTGATCTT AAGGCTTGGC GCTCTCTCAT CTGAAGTCTT TATCGATGCT GATTTAGATA GGAAAACTCA ATCCAGTGTT GAGGTTACTC TAGTGCGTGA AGGGCTAAGA AGTAGTTATG GCGATATTGA ACTATTTTTG GTATCAAGTG GTCAGGAGTT AGAAAACGTA GGTAGTTATA AAAATGCAGC TGTATACACA GAGTTAACAG CGCGCACCTT TGCTATTGAG TTATCTAAGC CAGTTGAGAG AGGTCGTGAA CTCATTGTGC GTTATCGGGA GAGTGAGAGC TTATCCGATG CAAAAGTAGT TGAGACTCGA ATCGTTCTTT AA
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Protein sequence | MKKFFLSYFI ASLFSSAAYA NLLVTPTRVE LDNKAQRSAV FSLVNKGKQD ARYNIYFEDK KLLPTGDYVS LENSSTSLAK FVRYSPRRVS LAPEEGTRVR MALRLPKGTP EGEYRSYIVF HQIPLAPTAI DNEQKNTSNT LSLSVTAYMR ISIPVILRLG ALSSEVFIDA DLDRKTQSSV EVTLVREGLR SSYGDIELFL VSSGQELENV GSYKNAAVYT ELTARTFAIE LSKPVERGRE LIVRYRESES LSDAKVVETR IVL
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