Gene Swoo_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2568 
Symbol 
ID6116865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3143091 
End bp3143882 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content41% 
IMG OID641634098 
Producthypothetical protein 
Protein accessionYP_001760940 
Protein GI170726914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00527973 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAT TTTTTTTGAG CTATTTTATA GCTTCACTTT TTAGTTCTGC GGCTTATGCC 
AACCTTCTTG TGACGCCAAC TCGTGTAGAG TTAGATAATA AAGCGCAGCG TAGTGCTGTA
TTTTCGTTAG TTAACAAAGG CAAGCAAGAC GCCAGATATA ATATCTACTT TGAAGATAAA
AAGTTACTTC CAACAGGGGA TTATGTCTCT TTGGAAAACT CATCTACCTC TTTAGCTAAA
TTTGTTCGTT ACTCTCCTAG GCGCGTGAGT TTGGCCCCTG AGGAGGGGAC GAGAGTCAGG
ATGGCTTTAA GGTTACCTAA AGGTACCCCA GAAGGTGAGT ACCGAAGTTA TATTGTCTTT
CATCAGATCC CATTAGCACC AACAGCTATC GATAATGAAC AAAAAAATAC CAGCAATACC
TTGAGTTTAT CGGTAACAGC TTATATGCGG ATCTCTATTC CAGTGATCTT AAGGCTTGGC
GCTCTCTCAT CTGAAGTCTT TATCGATGCT GATTTAGATA GGAAAACTCA ATCCAGTGTT
GAGGTTACTC TAGTGCGTGA AGGGCTAAGA AGTAGTTATG GCGATATTGA ACTATTTTTG
GTATCAAGTG GTCAGGAGTT AGAAAACGTA GGTAGTTATA AAAATGCAGC TGTATACACA
GAGTTAACAG CGCGCACCTT TGCTATTGAG TTATCTAAGC CAGTTGAGAG AGGTCGTGAA
CTCATTGTGC GTTATCGGGA GAGTGAGAGC TTATCCGATG CAAAAGTAGT TGAGACTCGA
ATCGTTCTTT AA
 
Protein sequence
MKKFFLSYFI ASLFSSAAYA NLLVTPTRVE LDNKAQRSAV FSLVNKGKQD ARYNIYFEDK 
KLLPTGDYVS LENSSTSLAK FVRYSPRRVS LAPEEGTRVR MALRLPKGTP EGEYRSYIVF
HQIPLAPTAI DNEQKNTSNT LSLSVTAYMR ISIPVILRLG ALSSEVFIDA DLDRKTQSSV
EVTLVREGLR SSYGDIELFL VSSGQELENV GSYKNAAVYT ELTARTFAIE LSKPVERGRE
LIVRYRESES LSDAKVVETR IVL