| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2550 |
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| Symbol | |
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| ID | 6116838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3118899 |
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| End bp | 3119960 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634071 |
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| Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_001760922 |
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| Protein GI | 170726896 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0746964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAACT CATGGGTTAA CACAGCAGTC GAGAAGATCG AATCAGACTA CCAGCGTAGT
GCCGATACTC ATTTAATTAA ACTCGATATT CCTCAACTAA CGGGGATCGA TATCTACTTA
AAAGATGAGA GTACCCACCC AACAGGTAGT TTGAAGCACA GGCTTGCTCG TTCGCTATTT
CTCTATGGAC TCTGTAACGG GTGGATCAAG GAAGGCACGA CAATCATCGA GTCTTCTTCC
GGTAGTACCG CCGTATCTGA AGCTTATTTT GCCCGCATGC TTGGTTTGCC CTTTATTGCT
GTTATGCCTA AGAGTACCGC TAAGAGAAAA ATTCAACAGA TAGAGTTTTA TGGTGGGACT
TGCCATTTCG TTAATCACTC CAGCGAGATC TATGCAGCAT CAGAGCAGTT AGCCACGCAA
CTAAATGGCC ATTATATGGA TCAATTTACC TATGCAGAGC GAGCAACGGA TTGGCGTGGA
AATAATAATA TTGCCAATTC AATTTTCGAA CAGATGACAC TTGAGCCCCA CCCTATCCCC
AAGTGGATTG TCATGAGTCC AGGAACAGGA GGAACATCGG CAACGATCGG TCGCTATATT
CGTTATCAGC AACTCGACAC ACAACTTTGT GTGGTTGACC CTGAACACTC AGTATTTTAT
GACTACTTCA CAACCGGTGA TAAAAGCTTA ACTTCGTGCC ATGGAAGCAA AATAGAGGGG
ATAGGAAGAC CAAGAGCAGA GCCCTCTTTC ATTCCGGGTG TCATTGATCA TATGGAGAAA
ATACCAGATG CTGCTTCAGT GGCAACCATC TACTGGCTTG AGAAATTAAT CGGTAGAAAA
GCAGGCCCTT CAACTGGCAC CAACTTGTAT GGCGCTCTTA ATATCGCATG TGACATGCTA
GCAAAAGGTC AACAGGGCTC TATCGTTACC CTTTTGTGTG ACTCAGGGGA GCGATACCTA
GACAGCTATT ACAACCCTGA TTGGGTTAAC GATAACATTG GAGAACTTAC AGAGTATGAG
GCTAAATTGG CTCAATTTAA CCTCACAGCT AGCTTAAACT GA
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| Protein sequence | MTNSWVNTAV EKIESDYQRS ADTHLIKLDI PQLTGIDIYL KDESTHPTGS LKHRLARSLF
LYGLCNGWIK EGTTIIESSS GSTAVSEAYF ARMLGLPFIA VMPKSTAKRK IQQIEFYGGT
CHFVNHSSEI YAASEQLATQ LNGHYMDQFT YAERATDWRG NNNIANSIFE QMTLEPHPIP
KWIVMSPGTG GTSATIGRYI RYQQLDTQLC VVDPEHSVFY DYFTTGDKSL TSCHGSKIEG
IGRPRAEPSF IPGVIDHMEK IPDAASVATI YWLEKLIGRK AGPSTGTNLY GALNIACDML
AKGQQGSIVT LLCDSGERYL DSYYNPDWVN DNIGELTEYE AKLAQFNLTA SLN
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