Gene Swoo_2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2549 
Symbol 
ID6116833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3117594 
End bp3118085 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content46% 
IMG OID641634066 
Producthypothetical protein 
Protein accessionYP_001760921 
Protein GI170726895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.625726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0597268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCAA GTGCTGTTTT AATCAATGAG TCCCAACTTG GGACACGCCT TAATCATGCT 
ATTGATCATG ATAGGCGTGG AGAGTTTGCC CTTTTATTGG CACTACTCTC TTGTGATGCT
CGGGATATGG CTCAGTTTCA GCTCGATGAT GGGGCTCTTG AGCCTGAGCT TGCTTTGCGT
AAAAAATTTG AGCTGCCAGA AGCGCAAGCG TTAATTAATG ACTTGACGAT ACAGGACTCT
CCCATTGATA ACAGCTCTGC TTTCTCTCAT GGTGGGGTAA GAGCATTTCA ACTTATGCAA
GCATTGAAGC CCGAGGCACT TGTTATAAGA GGGGATAAGT CGGCGCAGAT GCAGAGAGTG
CTGACTAATT GCGATCTACT GACTCGGCAA AAGTTTAATC ACAGTGCTAA ATCTGAACTT
TACCACGCCT TAGATACCCA TTTTGTTGAT CAATTAGCCC AGCAGAGACA GATGAGTCGA
ACACTGGCCT GA
 
Protein sequence
MRPSAVLINE SQLGTRLNHA IDHDRRGEFA LLLALLSCDA RDMAQFQLDD GALEPELALR 
KKFELPEAQA LINDLTIQDS PIDNSSAFSH GGVRAFQLMQ ALKPEALVIR GDKSAQMQRV
LTNCDLLTRQ KFNHSAKSEL YHALDTHFVD QLAQQRQMSR TLA