Gene Swoo_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2546 
Symbol 
ID6116830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3114367 
End bp3114849 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content43% 
IMG OID641634063 
ProductSecC motif-containing protein 
Protein accessionYP_001760918 
Protein GI170726892 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.117473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTG AAACAGAAAC TTTATGCCCA TGCGGTCAAA ATGACCGCGA ACACCCTCAC 
CTCTACACAG ATTGTTGCGC CCCCTACCAC CAAAATATCA AAACGGCAGG CACACCTGAA
AAATTAATGA GAAGCCGTTA TGCCGCCTTT GTACTCGGTG AATACGACTA TTTAATTCAA
ACTCATCACC GCGATTACTT AGGTGATCTT ACTGTAGAAG TATTAGCCGA ACATACACCA
CAATGGCTCT CTCTGCAGGT GCTATCAACT CAAACTAAGG GGGATATGGG TGAAGTTTGC
TTCCAAGCTT GGTACCGTGA TGGCAACAAC ATTGATGCGA TTCATGAATG TTCCCAGTTT
GTACAGGAAG CAAACAGATG GTTTTATACT CAGGGGACAC AAAAGCCAGC AATTTATCCA
AAGAGAAACG ATACTTGTCT ATGTAATAGT GGCAGAAAAT ACAAGCAATG CTGCCTAAAA
TGA
 
Protein sequence
MTTETETLCP CGQNDREHPH LYTDCCAPYH QNIKTAGTPE KLMRSRYAAF VLGEYDYLIQ 
THHRDYLGDL TVEVLAEHTP QWLSLQVLST QTKGDMGEVC FQAWYRDGNN IDAIHECSQF
VQEANRWFYT QGTQKPAIYP KRNDTCLCNS GRKYKQCCLK