Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2546 |
Symbol | |
ID | 6116830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3114367 |
End bp | 3114849 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641634063 |
Product | SecC motif-containing protein |
Protein accession | YP_001760918 |
Protein GI | 170726892 |
COG category | [S] Function unknown |
COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.117473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTG AAACAGAAAC TTTATGCCCA TGCGGTCAAA ATGACCGCGA ACACCCTCAC CTCTACACAG ATTGTTGCGC CCCCTACCAC CAAAATATCA AAACGGCAGG CACACCTGAA AAATTAATGA GAAGCCGTTA TGCCGCCTTT GTACTCGGTG AATACGACTA TTTAATTCAA ACTCATCACC GCGATTACTT AGGTGATCTT ACTGTAGAAG TATTAGCCGA ACATACACCA CAATGGCTCT CTCTGCAGGT GCTATCAACT CAAACTAAGG GGGATATGGG TGAAGTTTGC TTCCAAGCTT GGTACCGTGA TGGCAACAAC ATTGATGCGA TTCATGAATG TTCCCAGTTT GTACAGGAAG CAAACAGATG GTTTTATACT CAGGGGACAC AAAAGCCAGC AATTTATCCA AAGAGAAACG ATACTTGTCT ATGTAATAGT GGCAGAAAAT ACAAGCAATG CTGCCTAAAA TGA
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Protein sequence | MTTETETLCP CGQNDREHPH LYTDCCAPYH QNIKTAGTPE KLMRSRYAAF VLGEYDYLIQ THHRDYLGDL TVEVLAEHTP QWLSLQVLST QTKGDMGEVC FQAWYRDGNN IDAIHECSQF VQEANRWFYT QGTQKPAIYP KRNDTCLCNS GRKYKQCCLK
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