| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2537 |
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| Symbol | |
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| ID | 6116821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3101606 |
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| End bp | 3103432 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634054 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_001760909 |
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| Protein GI | 170726883 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.234761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.449195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCAG TAGTCCAGAC AGTAACAGAT AGAATCATAG CTCGAAGTCA AGCGTCCAGA
GCTCAATACC TCGCGGCTCT TGATGAGGCC AAGAACAGTG GCGTTCACCG TAGTTCTCTG
AGTTGCGGTA ATCTAGCCCA TGGTTTTGCA GCTTGTAAAC CCGATGAGAA GCAGTCAATC
AAGGCGTTAA CTAAGGCCAA TATCGGCATT GTTACCGCGT TTAATGACAT GCTTTCGGCG
CACCAACCCT ATGAAACTTA CCCTGACTTG CTTAAAAAAG CATGTAATGA CGTAGGCAGT
GTTGCACAAG TCGCTGCAGG TGTCCCTGCT ATGTGTGATG GTGTGACCCA AGGTCAACCT
GGCATGGAGC TTAGCTTGCT AAGCCGTGAA GTTATTGCCA TGTCTACAGC CGTTGGTCTC
TCTCACAATA TGTTTGATGG TGCTTTACTA CTGGGTATTT GCGACAAGAT TGTACCAGGT
CTGTTGATCG GTGCATTGAG CTTTGGTCAT CTACCAATGT TATTTGTACC AGCCGGCCCT
ATGAAATCAG GGATCCCAAA TAAAGAGAAG GCGCGTATAC GTCAGCAGTT CGCTCAAGGG
AAGGTTGATC GCAATGCGTT ACTCGAAGCT GAGTCTGCCT CTTATCACAG TGCTGGTACA
TGTACCTTCT ATGGCACGGC TAACAGTAAT CAGTTAATGC TAGAGGTGAT GGGTCTGCAA
CTGCCAGGAT CATCATTTGT TAATCCTGAC GACCCACTGC GTGAGGAGCT CAATAAAACT
GCCGCTAAGC AGGTGTGCCG TTTGACACAA ATGGGTACTC AATACACGCC TATTGGTGAA
GTGGTCAATG AAAAGTCTAT CGTGAACGGC ATCGTTGCAT TGTTAGCGAC AGGTGGCTCT
ACTAACTTAA CCATGCATAT CGTGGCTGCG GCTCGCGCTG CTGGCATCAT TGTTAACTGG
GATGATTTCT CTGAGCTATC GGATGCAGTG CCATTAATTG CACGTGTTTA TCCAAATGGC
CATGCAGATA TCAACCATTT CCACGCTGCT GGTGGCATGG CATTTTTAGT ACGAGAGCTG
CTTGATGCAG GTCTTTTACA TGAAGATGTG AATACCGTTG CAGGTTACGG TTTACGTAAA
TACACCCAAG AGCCTCGTCT TATTGATGGT GAGCTTACTT GGGTAGATGG CCAAGTCGAT
AGTTTAGATG CTGAAGTGTT AACTAAAGTC AGTGAGCCTT TCCAAGCAAA CGGTGGCCTT
AAGCTACTGA AAGGTAACCT TGGCCGAGCA GTGATTAAAG TCTCTGCGGT ACAGGAACAG
CATCGTATCG TTGAAGCGCC AGCTGTTGTG ATTGACGATC AAAATAAGCT TGATGCCATC
TTTAAAGCGG GTGAGTTAGA TAAAGATTGT GTTGTAGTGG TAAAGGGTCA AGGCCCTAAA
GCCGTTGGTA TGCCTGAGCT GCATAAACTC ACACCGATTT TAGGCACGCT GCAAGATCGC
GGCTTTAAAG TCGCACTACT TACTGATGGC CGTATGTCTG GTGCATCGGG CAAGGTACCT
GCGGCAATCC ACCTCACGCC AGAAGCGTTA GATGGTGGAT TAATCGCTAA GGTTCAAAAT
GGCGATATGA TCAGAGTTGA TGCTAAAACG GGTGAACTAA CACTGCTAGT TTCTGAGCCA
GAAATTGCAG CGAGAGAGCC TGAAAAGGTC GACCTTCGCA GTACAAGCTA TGGAATGGGC
CGAGAGCTAT TTGGTGCATT ACGTTCAAAT TTAAGTAGTC CGGAAACTGG CGCTCGTTGC
ACCAGTGCCA TTGATGAAAA CTATTAA
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| Protein sequence | MHSVVQTVTD RIIARSQASR AQYLAALDEA KNSGVHRSSL SCGNLAHGFA ACKPDEKQSI
KALTKANIGI VTAFNDMLSA HQPYETYPDL LKKACNDVGS VAQVAAGVPA MCDGVTQGQP
GMELSLLSRE VIAMSTAVGL SHNMFDGALL LGICDKIVPG LLIGALSFGH LPMLFVPAGP
MKSGIPNKEK ARIRQQFAQG KVDRNALLEA ESASYHSAGT CTFYGTANSN QLMLEVMGLQ
LPGSSFVNPD DPLREELNKT AAKQVCRLTQ MGTQYTPIGE VVNEKSIVNG IVALLATGGS
TNLTMHIVAA ARAAGIIVNW DDFSELSDAV PLIARVYPNG HADINHFHAA GGMAFLVREL
LDAGLLHEDV NTVAGYGLRK YTQEPRLIDG ELTWVDGQVD SLDAEVLTKV SEPFQANGGL
KLLKGNLGRA VIKVSAVQEQ HRIVEAPAVV IDDQNKLDAI FKAGELDKDC VVVVKGQGPK
AVGMPELHKL TPILGTLQDR GFKVALLTDG RMSGASGKVP AAIHLTPEAL DGGLIAKVQN
GDMIRVDAKT GELTLLVSEP EIAAREPEKV DLRSTSYGMG RELFGALRSN LSSPETGARC
TSAIDENY
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