Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2532 |
Symbol | |
ID | 6116816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3096361 |
End bp | 3097995 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641634049 |
Product | sulfatase |
Protein accession | YP_001760904 |
Protein GI | 170726878 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.301618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.874005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTAGCTC GTATTAAAAT ACTTACCATA AACCAATTTA CCCTGACTAT TGCCATATTC TATGTGTGCA TCTTTAATGT CCCTTTCTTC CATATTGTTC AGAAGGGAGT GGAGAAGCAA GCTGAAGTCG ATCCGTTTTT TATCGCCAGT ATTCCCCTTT TTCTGACTTT TGTACTGAGC TTTATCTTTT CACTTTTCAG CGTTAAATAC CTATTGAAAC CCATTTTTAT CTCGATGACG CTACTTTCAT CGAGTGTGTT CTTTGCGGCG TTGCAATATG GGGTCGTATT TGATACCGGT ATGATTGAGA ACACACTGCA GACAAATCAA GCAGAAGCTT TTACCTACAT CAACTTCTCA TCAGTGTTCA ATTTTGTTCT AACAGGTTTA ATACCCGCTT TTCTGATCTT GAAGGTAAAA ATTGCATATA AACCCGCTAT GAAAGAGGCG ATCCATAAAC TGGGTTTTAT GTTGCTAATG TTGATAGGTG TTGGGGTAAT AGGCTTCTTT TATTATCAGA GTTATGTTGC TTTTGGTCGA AACAATGATG AGCTTAAACG CTTTATCGTT CCGACCTATG TCATTGCTTC AATAGCAAAA TATACAAATC AACATTATTT TCAAACTCCG CTAGATTATA AGCAGCAAGG CTTAGATGCT GTAAACATAC ACACTAACAC TACCGGCAAG CCTAACCTTA TGGTGCTTGT GGTTGGTGAA ACTGCGAGAG CTAAGAACTA TGAATATTAT GGCTATGATA AACCGACTAA CTCCCATACC AAGAAGCATG GCGTTACCGC ATTTAACAAC ATGACATCAT GTGGAACAGC AACGGCGGTC TCAGTTCCCT GTATGTTTTC AAATATGAAG CGTGAGAATT ATGATGCCAG AAGAGCCCAA GCGCAAGATG GCGTGCTCGA TGTGCTTGAC CATGCCGATA TTCAGCAAAT ATGGCTTGAT AATGATAGCG GCTGTAAAGG TGTCTGCGAC AGAATCGCTA ATATTACTAT TAAACAAGAC AGCTCCCCTG AGTTATGTGA TGGCCATTCC TGTTATGATC AAGTTCTTCT AGATCAATTA GATAAGGAGC TTACCAAGAT AGAACATCGT GATACTTTAA TCGTATTGCA TATCATGGGT TCCCACGGCC CGACTTATTA CCTCAGGTAC CCACAAGAGC ATAAAAGGTT TGTACCAGAT TGCCCTCGCA GTGATATACA AAACTGTAGC GATGAAGCAT TAATGAACAC CTACGACAAT ACTATTCTCT ATACGGATTA CATTATCAGT CGGGTAATAG ACAAGCTAAA AGCTGAAAGT GAAAAGTTTA ATACTGGCAT GATATATATG TCAGATCATG GCGAGTCATT GGGGGAGAAG GGACTATATC TGCATGGCTC TCCTTATGTT GTGGCGCCAG ATGAGCAGAT AAAGATCCCA ATGCTTACCT GGTTTTCACC TTCGTTTGTA ACTGAAAATA GATTGGATCA AGTCTGCCTA GGAGAGAAAG CTAAAAAAGG TGGCTTCTCA CACGATAACC TTTTTGACTC CCTTTTGGGG ATAATGAACG TGAAAACATC TGTTTATGAT AAGAAACTTG ACCTTTTTAA TTCTTGTAGG TTAAAAGCTA GTTAA
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Protein sequence | MLARIKILTI NQFTLTIAIF YVCIFNVPFF HIVQKGVEKQ AEVDPFFIAS IPLFLTFVLS FIFSLFSVKY LLKPIFISMT LLSSSVFFAA LQYGVVFDTG MIENTLQTNQ AEAFTYINFS SVFNFVLTGL IPAFLILKVK IAYKPAMKEA IHKLGFMLLM LIGVGVIGFF YYQSYVAFGR NNDELKRFIV PTYVIASIAK YTNQHYFQTP LDYKQQGLDA VNIHTNTTGK PNLMVLVVGE TARAKNYEYY GYDKPTNSHT KKHGVTAFNN MTSCGTATAV SVPCMFSNMK RENYDARRAQ AQDGVLDVLD HADIQQIWLD NDSGCKGVCD RIANITIKQD SSPELCDGHS CYDQVLLDQL DKELTKIEHR DTLIVLHIMG SHGPTYYLRY PQEHKRFVPD CPRSDIQNCS DEALMNTYDN TILYTDYIIS RVIDKLKAES EKFNTGMIYM SDHGESLGEK GLYLHGSPYV VAPDEQIKIP MLTWFSPSFV TENRLDQVCL GEKAKKGGFS HDNLFDSLLG IMNVKTSVYD KKLDLFNSCR LKAS
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