Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2531 |
Symbol | |
ID | 6116815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3095138 |
End bp | 3096181 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641634048 |
Product | diguanylate cyclase |
Protein accession | YP_001760903 |
Protein GI | 170726877 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.204125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.837026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTAG CTAAACATCT TTCTGATATT GAGGTCTCTG CAAAAATTCT TAGGCATGCT GTACCCAAAA TGTCTGAACT GGATATTCCT GTTACTCCAG ATAACTACTC AGTTTGGTAT GAGTATTTTT TGGGGGTGAA TTTAGACTTA AATCGTACCA TTGATGAATA TATCTCAAAA GGTGTGACTT TTACGGCCGA GATAAACAGT GAGCTGGTAA AAAATTATAT TTTAGAGCAA TCTCCTGAAG TGATAGAAAA TGTCCATGTA GAGACACAAT TGGTGATCAA TAACCTACTG GAAAAAGTCA CTCAGATGAG TAGTGGTACT GCAAACCTAA CTGAGACATT AAGTGAGTTT CATCAAGAGC TCAAACAAAC TGTTGATGCC GATGTTTTAT TGAAGTTGGT AAATACATTA GCCGATGAAA TGGGAAGTGT CATTAGTGAC AATAAGCAGA TGGAGGCAAG TCTCAATACC ATGAACGAAG AGGTGAGCTC GCTAAAGTCT GAGATGGAAA ACCTGAGTAT TGTGGCGCAA ACGGATCAGT TAACTTCTCT CTTTAACCGC CGTGCGTTTG AAAAAGAGAT AGAATCGCAC ATGATACATT ACAAGCAAGA TCACAGCGCA AGCTGTTTGC TTGTGGTCGA TATTGATCAT TTTAAACTTT TTAATGATAC CCATGGGCAT TTAATTGGTG ACAAGGTGCT CGCCTATGTC GCTTTAGCTC TTAAGAAAAC AGTCAAGGGA ACGGATTTCG TTGCCAGATA TGGTGGAGAA GAGTTTGTTG TCTTACTGCC TAATACTGAG TTAAATGATG CTTTAACGGT GGCAGAACTC GTGCGCCAGA AAATAGCAAA TCAAAAACTC AGCATTGGCA AGGAGGATAA ACACTCCCTT GGTTCAATTA CGGTTTCTGT TGGTGTTTCT ACCTTGCATA ATTCTGATGA CAGAGAAAGC TATTTTATTA GAGCCGATGA GGCACTTTAC CGAGCGAAAT CCTCTGGCCG TAACTGTATC TGTAGTGAGT TGGCTGAATC TTAG
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Protein sequence | MNLAKHLSDI EVSAKILRHA VPKMSELDIP VTPDNYSVWY EYFLGVNLDL NRTIDEYISK GVTFTAEINS ELVKNYILEQ SPEVIENVHV ETQLVINNLL EKVTQMSSGT ANLTETLSEF HQELKQTVDA DVLLKLVNTL ADEMGSVISD NKQMEASLNT MNEEVSSLKS EMENLSIVAQ TDQLTSLFNR RAFEKEIESH MIHYKQDHSA SCLLVVDIDH FKLFNDTHGH LIGDKVLAYV ALALKKTVKG TDFVARYGGE EFVVLLPNTE LNDALTVAEL VRQKIANQKL SIGKEDKHSL GSITVSVGVS TLHNSDDRES YFIRADEALY RAKSSGRNCI CSELAES
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