| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2529 |
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| Symbol | |
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| ID | 6116813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3091052 |
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| End bp | 3091540 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641634046 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001760901 |
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| Protein GI | 170726875 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAAG ATGGCACAGT TGCGCCTAAA GAACGTATTA ATATTAAATA TGTTCCCTCT
ACAGGTGATC AACAGGCGGA AATGGAACTT CCACTCAAGA TGTTGATTGT GGGTGATTTT
AAAGGTCACG CAGAAGATAC ACAGCTTGAA GAAAGACAAT CAGTATCTGT AAATAAAACA
AACTTCGAAT CAATAATGAA AGAAAGCGGC CTATCTGTTA ATACAACGGT TGCGAATAAA
TTAACTGACA ATGAATCTGA CGAGTTAAAT GTAGAATTAA ACTTCAGTTC CATGAAAGAT
TTCTCTCCTG ATGCCATCGC TACACAAGTC CCTGAAATAA ACAAACTCAT TGAGCTAAGA
GAAGCCCTTG TCGCTTTAAA AGGCCCATTA GGTAATATCC CATCATTTAG AACCAAGCTG
CAGGAATTGA TTGAGACCGA GGATTCTCGT GAACAACTTT TAGCAGAACT TCAAACTCTA
GATAACTAG
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| Protein sequence | MAKDGTVAPK ERINIKYVPS TGDQQAEMEL PLKMLIVGDF KGHAEDTQLE ERQSVSVNKT
NFESIMKESG LSVNTTVANK LTDNESDELN VELNFSSMKD FSPDAIATQV PEINKLIELR
EALVALKGPL GNIPSFRTKL QELIETEDSR EQLLAELQTL DN
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