Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2528 |
Symbol | |
ID | 6116812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3089487 |
End bp | 3090962 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641634045 |
Product | EvpB family type VI secretion protein |
Protein accession | YP_001760900 |
Protein GI | 170726874 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCAA TGGAAACAGC GCAGGAAAGT AGTCAGGTAT TAAATGGTAA TCTTCTAGAT GAGATTTTGG CTCAAACCAA GATAACACCT ATCGATGAAG GCTATGATGT TGCTAAAAAA GGGGTCGCTG CCTTTATCAG CAATATTCTT GAAACAGAAT CTAACAGCGA GCCTATCAAT AAAGCGCTTG TTGATAAAAT GCTGGTCGAG TTAGATAAAA AGATTAGTAG TCAGATGGAT CAAATTCTTC ATGATGAATC TGTTCAACAG ATGGAGTCAT CGTGGAGAAA TTTAAAGTTA TTAGTTGATA GAACTGACTT TAGAGAAAAT ATAAAGATTG AAGTTCTCCA TGTAACAAAA AGTGAGTTAC TTGACGATTT TGAGTTTGCA CCGGAAACGG TTCAATCGGG TCTTTACAAG CACGTATACT CTTCGGGTTA TGGTCAGTTT GGTGGTGAGC CGATAGGGGC TATTGTGGGT AATTATGCCT TTACGCCATC TTCTCAAGAT ATGAAGCTGT TGCAGTATGT CTCAGCGGTT GGCGCGATGG CTCATGCACC TTTCTTATCC TCCGTTGGCC CTGAGTTTTT TGGTATTGAT TCGTTTGAAG AGTTACCGAA TTTAAAAGAT CTAAAATCAA CATTTGAAAG CCCTAAATAC ACTAAGTGGC GCTCATTAAG AGAGTCTGAA GATGCAAGGT ACTTGGGGCT AACAGCGCCT AGATTCCTAC TGCGTGTTCC CTATGATCCT ATTGATAACC CAATTGGTTC ATTTAACTAT CGTGAAAGTG TTCATGCAAG CCACGAAGAT TACCTTTGGG GTAACACAGC ATTTGCTTTA GCAACACGAT TGACCGAAAG CTTCGCTAAG TACCGCTGGT GCCCAAATAT TATTGGCCCA CAAAGCGGTG GCGCCGTTGA CGATCTTCCT GTTCATGTCT TTGAATCGAT GGGGGCACTG CAGTCAAAAA TTCCGACAGA AGTACTCATC ACCGATCGCA AAGAGTTTGA ACTTGCTGAC GAAGGTTTTA TTAGCCTTAC CATGCGCAAA GGTAGCGACA ATGCAGCGTT TTTCTCAGCT AACTCAATCC AAAAGCCAAA AGTGTTTCCG AATACCAAAG AGGGCAAGGA GGCTGAGACC AACTACAAGT TAGGCACTCA GATCCCTTAC ATGATGATTA TCAATCGTCT AGCTCACTAC ATTAAGGTAT TGCAGCGTGA GCAGATCGGT TCATGGAAAG AGCGTCAAGA TCTTGAGCGA GAGCTCAATA GTTGGATTAA ACAGTTTGTC GCTGATCAGG AAAATCCACC AGCAGATGTC AGAAGCCGTA GACCACTACG TGCAGCTAAA GTCGAAGTGA TGGATGTACA GGGCGATCCA GGATGGTATC AGGTCTCGAT GGCGGTTCGA CCGCACTTCA AATACATGGG AGCTAACTTC GAACTCTCTT TGGTTGGACG TCTAGACCAG GAGTAA
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Protein sequence | MESMETAQES SQVLNGNLLD EILAQTKITP IDEGYDVAKK GVAAFISNIL ETESNSEPIN KALVDKMLVE LDKKISSQMD QILHDESVQQ MESSWRNLKL LVDRTDFREN IKIEVLHVTK SELLDDFEFA PETVQSGLYK HVYSSGYGQF GGEPIGAIVG NYAFTPSSQD MKLLQYVSAV GAMAHAPFLS SVGPEFFGID SFEELPNLKD LKSTFESPKY TKWRSLRESE DARYLGLTAP RFLLRVPYDP IDNPIGSFNY RESVHASHED YLWGNTAFAL ATRLTESFAK YRWCPNIIGP QSGGAVDDLP VHVFESMGAL QSKIPTEVLI TDRKEFELAD EGFISLTMRK GSDNAAFFSA NSIQKPKVFP NTKEGKEAET NYKLGTQIPY MMIINRLAHY IKVLQREQIG SWKERQDLER ELNSWIKQFV ADQENPPADV RSRRPLRAAK VEVMDVQGDP GWYQVSMAVR PHFKYMGANF ELSLVGRLDQ E
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