| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2504 |
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| Symbol | |
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| ID | 6116788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3053632 |
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| End bp | 3055668 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641634021 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001760876 |
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| Protein GI | 170726850 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.106056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.195279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGTT GGGAACGTAT TGGGATCTCG CCTACTGTCG ATAAGATGTT AATTAAACGG
GCTTATGCAA AACAGTTAAG ATTACACCAT CCAGAAGATG ATCCTGAAGG CTTCAAAACC
TTAAGAGCTG CGTTAGAAGA TGCATTAGCG CAAGCAAAGT GTCTCTCTGT AGGTGAAGTA
TTTATCTCAT CTCAGGAGAT AGATTTAACC CCAACAGTTG AAAAATCAAT GGAGCAAGAT
GAGCCTCAGC AGGAGCCTAT CACTGTTAAT GAGCTAGATT TTGATGAGTC CAAAAGGATT
TTTGAGCAGT TGCAGAGAAA GATTATTGAA CTCTATGGTC ATTTTGATTC GAGAGTACAA
CTGTCACTAT GGAAGCTAGC ACTTGACGGG GGTGAGCAAT GGAACATCGA GGTTAAACAG
AACACTGCAT TTTGGCTTTT TAACTTTATT GGCCACTATC CTTTTATTCC TGAAAATATC
TTCAACTATC TAGAGAAACG CTTCTCTTGG TATGACAATT ACCTTGCATT GAAACGTGAA
TTTAGTGAAG AGTTCATCGA TAGCGTATTT GACCGATTTA GCCGTGCTAA ATGGAGCTTA
AGTTACCAAG GTGTCGACTT TTCTGATCCA AGCCTGATAA ATGATGTTGA GTCATACCTG
TCAAAGCGAG AGCATTTAGA GTATCTGGTG CTTAATAAAC AAGGAAATGG TGATGAGTTG
ATCACCGAGC TTAATAAGTT CTGTGTACAA GACTTTGAAT TAGATCGCTT ATTATTTCTC
TATTATCAAA ACCTACAAAG CCCTTCACAA GCATCAGCTT ACTGCAAGAA GTTAGTGGTA
GAACATCCTA ATAGGGTGGA GGGTTACTTA AACAAAGGCA ATATAGACTA TAGACAGAAG
CGGTTTAGTG AAGCTGCACA TAGCTACAAA GCAGTTTTAG CCCTAGATGA AAGTCATGGT
ATAGCATTAA AGGGCTTGGC TGGCTGTTAT TTAGAACTTA ATGATCTTTT TTCTGCGAAG
TGTTTGTATG AGCAAGCCTT GTTGCAAGTG CCTTTTGATG TAGAAGCACG TATTCAATTA
ATTCAGATAA ACCAGAAATT GATTAAGCAT AGCTTTGATC TACTTGTTGA GCAGCCAAAT
AGTGCCAAAG CCCATAAACA GATCGCTGAG GGGTATTTAG AAATTGGTGC ATACACTGAA
TGCATTGAGT TTCTTGAGGG GATTATTGAT AAAACTAAAC CTATATTTGA AAATACCTCT
CGTTTAGTCA AAGGTAGCAT TTTTTCTGTA TTGTTCAGGT GGTTATTTGT CTCTGATATT
GAGCAAGTGT TTAATTATCG AAATAGTGAG CTTCACCATA TGTTAGGTTT GGCATATGAG
GCGACAAAAC AGGCTGAAAA AGCAGAAGTC GCTTATATGA CAGCGTTAAT GAAGGCTGAA
GATGAGGGCA CTAATGGGTA TGACTCTTTA GTTCAATTAG CAGACTTTTA CATTGAGCAT
AAAGAGTATG AAGAAGCACT GTCTCTACTC AAAAAGGCCT GTATGCTAAC GCCAGATAGC
GCCAGAGTAT TTGCTTTATT GGCGGATGCT CAGCGTTATT TGGAGATGCA AGAGGAGGCG
CTAAATAGCA TTAACCGTGC AATTGCTTTG GATGATAGAC CTTGGATCTA CTATTCCATT
CGTTCGATAT TGCTCATTTC AGCTCAAAGC TATAAAGCTG CAGCGGGTGA TTTAAACAAG
GTGCTACAAG CTGCGCCTAA CTTCTCTGGT GCTTTATATC GTCAAGGAGT TTGCCATCGT
CATTTAGGGT TATATAAAGA GGCGATGGCA TTTTTTAAGT CGGCTGTTGA TTATAATACA
GGGTTTCGAA CATCGGCTTT AGAGTGGTTG AAGTTAGCAT GTGAAGTTTC GGATTTAGAT
AATGCTGAAT TGGCAATGAG CGCCTTTTTG AATGCTGATG GAGCCCTTGA AACTGTGGCT
GATTATAAAT TAGAGATTGA AAAGATGAGC AATCAAAGGA GCGATACTCA TGAATAG
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| Protein sequence | MSCWERIGIS PTVDKMLIKR AYAKQLRLHH PEDDPEGFKT LRAALEDALA QAKCLSVGEV
FISSQEIDLT PTVEKSMEQD EPQQEPITVN ELDFDESKRI FEQLQRKIIE LYGHFDSRVQ
LSLWKLALDG GEQWNIEVKQ NTAFWLFNFI GHYPFIPENI FNYLEKRFSW YDNYLALKRE
FSEEFIDSVF DRFSRAKWSL SYQGVDFSDP SLINDVESYL SKREHLEYLV LNKQGNGDEL
ITELNKFCVQ DFELDRLLFL YYQNLQSPSQ ASAYCKKLVV EHPNRVEGYL NKGNIDYRQK
RFSEAAHSYK AVLALDESHG IALKGLAGCY LELNDLFSAK CLYEQALLQV PFDVEARIQL
IQINQKLIKH SFDLLVEQPN SAKAHKQIAE GYLEIGAYTE CIEFLEGIID KTKPIFENTS
RLVKGSIFSV LFRWLFVSDI EQVFNYRNSE LHHMLGLAYE ATKQAEKAEV AYMTALMKAE
DEGTNGYDSL VQLADFYIEH KEYEEALSLL KKACMLTPDS ARVFALLADA QRYLEMQEEA
LNSINRAIAL DDRPWIYYSI RSILLISAQS YKAAAGDLNK VLQAAPNFSG ALYRQGVCHR
HLGLYKEAMA FFKSAVDYNT GFRTSALEWL KLACEVSDLD NAELAMSAFL NADGALETVA
DYKLEIEKMS NQRSDTHE
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