| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2498 |
|---|
| Symbol | |
|---|
| ID | 6116782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3048744 |
|---|
| End bp | 3049868 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641634015 |
|---|
| Product | 2-methylcitrate synthase/citrate synthase II |
|---|
| Protein accession | YP_001760870 |
|---|
| Protein GI | 170726844 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0246552 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGACA AGAAACTCAG TGGTGCAGGT CTTCGTGGTC AAAGTGCTGG AGAAACATCG
CTTTGTACTG TAGGTAAGTC AGGTTCTGGA TTAACTTATT GCGGCTATGA TGTGGCCGAC
TTAGCTGACA ATGCGACTTT TGAAGAGGTG GCATACCTAC TGTTTAATGG TGAGTTACCT
AATCGAGCAC AGCTTGATGC CTATAAAACA GAGTTAATGG CGATGCGCGA CCTACCTCAG
GCATTAAAAG AGGTATTACA ACGTATCCCT GCCGATGCTC ATCCAATGGA TGTGATGCGT
ACTGGTTGCT CATTTCTCGG TAATTTAGAA CCTGAAAATG ACTTTAGTGA ACAAAACCAA
GCCGCTAACC GCCTACTTGC CGCTTTCCCT GCAATCATGT GCTATTGGTA CAAGTTTTCT
CATGATGGAG TTGAGATTAA CTGTGTCACA GATGAAGATT CACTCGGTGG CCACTTCCTA
CACCTGTTAA ATGGCAAAAC GCCTTCAGAG CAACACAGAC GCGTAATGGA TGTGTCGCTG
ATCCTCTACG CTGAGCATGA GTTTAATGCT TCAACCTTTA CTGCTCGTGT GTGTGCTTCG
ACTCTGTCTG ACATGTTCTC GTGTATCACA GGTGCTATCG GTACACTTCG TGGCCCTCTG
CATGGCGGCG CAAATGAAGC GGCAATGGAT ATGATCCAGA AGTTTAGCTC CCCAGCAGAT
GCCAAGACGC AGATGGCCGG TATGCTTGAG CGTAAAGAGA AGATCATGGG CTTTGGTCAT
GCGATTTACC GTACCTCAGA TCCACGTAAT GTGATCATTA AGGCGTGGTC TGAAAAACTG
GCTCAGGAAA ATGGTGATAC GTCGTTATAC GATATCTCTG TTGCCTGTGA AGAGTTTATG
TGGGACACCA AGAAGCTATT TTGTAATGCT GATTTCTTTC ACGCATCGGC TTATCATTTT
ATGGGCATTC CTACTAAGTT GTTCACGCCT ATATTTGTCT GCTCGCGTCT TACGGGGTGG
GCCGCTCATG TGATGGAGCA GCGCTCTAAT AACCGTATTA TTCGTCCAAG TGCGGATTAC
ACAGGATCTG AGCCAAGAAT GGTTAAGCCT ATCGCTGAAA GATAG
|
|---|
| Protein sequence | MVDKKLSGAG LRGQSAGETS LCTVGKSGSG LTYCGYDVAD LADNATFEEV AYLLFNGELP
NRAQLDAYKT ELMAMRDLPQ ALKEVLQRIP ADAHPMDVMR TGCSFLGNLE PENDFSEQNQ
AANRLLAAFP AIMCYWYKFS HDGVEINCVT DEDSLGGHFL HLLNGKTPSE QHRRVMDVSL
ILYAEHEFNA STFTARVCAS TLSDMFSCIT GAIGTLRGPL HGGANEAAMD MIQKFSSPAD
AKTQMAGMLE RKEKIMGFGH AIYRTSDPRN VIIKAWSEKL AQENGDTSLY DISVACEEFM
WDTKKLFCNA DFFHASAYHF MGIPTKLFTP IFVCSRLTGW AAHVMEQRSN NRIIRPSADY
TGSEPRMVKP IAER
|
|---|
| |