| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2497 |
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| Symbol | |
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| ID | 6116781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3045961 |
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| End bp | 3048570 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634014 |
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| Product | aconitate hydratase |
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| Protein accession | YP_001760869 |
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| Protein GI | 170726843 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00662485 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATACAA GTTACCGTAA ATCTTTACCG GATACCGATC TCGATTACTT CGACACTCGT
GCCGCCGTTG AGGCTATCAG CCCTGGTGCC TATGATAAGC TGCCGTATAC CTCCCGTGTA
TATGCTGAAA ACCTCGTTCG CCGCTGTGAG CCTACAAAAT TAACAGATTC ATTAAAACAG
ATTATTAACC GTCAACGTGA TCTGGATTTC CCTTGGTATC CAGCACGTGT TGTTTGCCAT
GACATTTTAG GTCAGACAGC GCTGGTGGAT CTTGCTGGAT TGCGCGATGC CATTGCTGAT
AAAGGTGGCG ACCCTTCCAA GGTAAATCCT GTTGTACCGA CACAGCTGAT TGTGGATCAC
TCATTAGCGG TAGAGCATGC AGGTTTTGAG AAGGACGCGT TCGATAAGAA CCGCGCCATT
GAAGACAGAC GTAATGACGA TAGATTTCAT TTTATCAACT GGACCAAAAC AGCATTTAAG
AATATCGATG TGATCCAGCC GGGTAACGGC ATTATGCATC AGATAAATCT TGAGAAGATG
TCACCTGTGA TTCAAGCTCG CGATGGCGTG GCTTTTCCAG ACACCTTGGT AGGAACAGAC
AGTCATACTC CCCATGTGGA TGCATTAGGT GTGATAGCAA TTGGAGTCGG TGGACTTGAA
GCTGAGAGTG TCATGCTTGG CCGTCCCTCG TATATGCGTC TTCCTGATAT CGTCGGTGTT
GAGCTGGTGG GTAAGCGTCA AAGTGGGATC ACTGCAACCG ATATCGTACT GGCTATCACA
GAGTTTTTAC GCAGCGAGAA GGTGGTGTCT ACCTATCTTG AATTCTTCGG TGAAGGCGCT
TTCGCGCTTA CACTTGGAGA CCGAGCGACT ATCTCAAATA TGACGCCTGA GTTTGGCGCT
ACAGCCGCCA TGTTCTACAT CGATGATAAA ACCATAGACT ACCTTAAGTT GACTGGTCGA
GATGATGCTC AAGTAAAACT GGTTGAAACC TATGCTAAAG CCAATGGGTT ATGGGCTGAT
AGCCTTAAAA ATGCTGAGTA TGAGCGGGTG CTCAAGTTTG ATTTATCATC GATTGGCCGT
AATATTGCGG GACCTTCAAA CCCGCACCGC CGTGTTGCTA CCAATGAGCT TGCTAAGAGT
GGTATCGCAG GTGTGGTAGA GAACGAAGAG GGCTTAATGC CCGACGGCGC TTGTATCATT
GCAGCCATTA CTAGCTGTAC CAACACCTCA AACCCTCGAA ATGTGATAGC AGCCGGTCTG
CTTGCGCGTA ACGCGAATGC CAAAGGTTTA ACGCGTAAGC CTTGGGTTAA AACCTCTTTA
GCACCAGGAT CCAAAGCGGT ACAACTCTAC CTTGAAGATG CCAAGCTGTT ACCTGAGCTC
GAAAGTCTTG GTTTTGGTAT CGTTGGTTTT GCCTGCACCA CTTGTAATGG CATGAGTGGG
GCGCTTGACC CTGTTATCCA ACAGGAGGTA ATCGACAGAG ATCTTTACGC CACAGCAGTG
CTTTCTGGTA ATCGTAATTT CGATGGCCGT ATTCATCCCT ACGCTAAACA AGCGTTCTTG
GCTTCACCAC CGTTAGTGGT GGCCTACGCC ATTGCAGGGA CCATACGCTT CGACATTGAG
AGAGACAGCT TAGGCACAGA CTCTCAAGGT AATGAGATCA CACTTAAAGA TATCTGGCCA
TCGGATGAAG AGATTGATGC GGTCGTCAAG GCGAGCGTAA AACCAGAACA GTTCCGTAAA
GTGTATGAGC CTATGTTCGA CATTAAAGTA GAGTATGGAG CAAACAATGA TCCGCAGTAT
GATTGGCGAC CACAGAGTAC CTATATTCGT CGTCCTCCCT ATTGGGAAGG AGCACTGGCA
GGTGAGAGAA GTATGAAAGG GATGCGTCCC TTAGCAGTAC TGGGTGATAA CATCACAACA
GACCACTTGT CTCCTTCAAA TGCGATCATG CTCGACAGTG CTGCTGGTGC GTATTTAGAT
AAGATGGGTC TACCTGAGGT GGACTTTAAC TCCTACGCAA CTCACCGCGG TGATCACTTG
ACTGCACAGC GGGCCACTTT TGCTAATCCT AAACTCTTTA ATGAGATGGT CACGACATTG
GGCAAAAATG GAGAGACTGA AATTAAGCAG GGATCATTAG CTCGTATTGA GCCTGAGGGT
GAAGTCTCAC GCATGTGGGA GGCGATTGAA ACTTACATGG ATCGTAAACA GCCACTGATC
ATCATTGCTG GTGCTGATTA TGGTCAAGGC TCAAGCCGCG ACTGGGCCGC TAAAGGTGTT
CGTCTTGCTG GCGTTGAAGT GATTGTGGCC GAAGGGTTTG AGCGTATTCA TCGAACTAAT
TTAGTGGGAA TGGGCGTGTT ACCCCTTGAG TTCACCAATG GCGAAAACCG CCATACGTAT
CAAATCGATG GTACAGAGAC CTATGATGTG GTTGGAGATC GAACTCCTGG TGCAAGGTTA
ACGCTTATTA TCAACCGTAA AAACGGCGAG TCCGTCGAGG TTCCAGTTAA GTGTCGCTTA
GATACCGCAG AGGAGGTCTC TATTTATGAA GCTGGCGGTA TTTTGCAGCG TTTTGCTCAA
GACTTCCTTG AATCTTCATC TGCGGCCTAA
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| Protein sequence | MNTSYRKSLP DTDLDYFDTR AAVEAISPGA YDKLPYTSRV YAENLVRRCE PTKLTDSLKQ
IINRQRDLDF PWYPARVVCH DILGQTALVD LAGLRDAIAD KGGDPSKVNP VVPTQLIVDH
SLAVEHAGFE KDAFDKNRAI EDRRNDDRFH FINWTKTAFK NIDVIQPGNG IMHQINLEKM
SPVIQARDGV AFPDTLVGTD SHTPHVDALG VIAIGVGGLE AESVMLGRPS YMRLPDIVGV
ELVGKRQSGI TATDIVLAIT EFLRSEKVVS TYLEFFGEGA FALTLGDRAT ISNMTPEFGA
TAAMFYIDDK TIDYLKLTGR DDAQVKLVET YAKANGLWAD SLKNAEYERV LKFDLSSIGR
NIAGPSNPHR RVATNELAKS GIAGVVENEE GLMPDGACII AAITSCTNTS NPRNVIAAGL
LARNANAKGL TRKPWVKTSL APGSKAVQLY LEDAKLLPEL ESLGFGIVGF ACTTCNGMSG
ALDPVIQQEV IDRDLYATAV LSGNRNFDGR IHPYAKQAFL ASPPLVVAYA IAGTIRFDIE
RDSLGTDSQG NEITLKDIWP SDEEIDAVVK ASVKPEQFRK VYEPMFDIKV EYGANNDPQY
DWRPQSTYIR RPPYWEGALA GERSMKGMRP LAVLGDNITT DHLSPSNAIM LDSAAGAYLD
KMGLPEVDFN SYATHRGDHL TAQRATFANP KLFNEMVTTL GKNGETEIKQ GSLARIEPEG
EVSRMWEAIE TYMDRKQPLI IIAGADYGQG SSRDWAAKGV RLAGVEVIVA EGFERIHRTN
LVGMGVLPLE FTNGENRHTY QIDGTETYDV VGDRTPGARL TLIINRKNGE SVEVPVKCRL
DTAEEVSIYE AGGILQRFAQ DFLESSSAA
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