| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2496 |
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| Symbol | |
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| ID | 6116780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3044652 |
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| End bp | 3045869 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641634013 |
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| Product | AcnD-accessory protein PrpF |
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| Protein accession | YP_001760868 |
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| Protein GI | 170726842 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.945381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00398819 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTCAGG ATGAGAAAGG TAAGACTGTA TTTTCTCCTC AGATAAAAGT ACCTGCGACC
TATATGCGTG GTGGCACAAG TAAAGGAGTC TTCTTTAATC TTGAGGACCT GCCAGCGCAG
GCTAAAATTG CGGGTAAGGC CCGTGATGCA CTACTACTGA GAGTGATCGG CAGCCCAGAT
CCTTACGGGA AGCAAACTGA CGGTATGGGA GGGGCGACCT CAAGTACAAG TAAAACAGTC
ATTATCTCTA AAAGTCGTCA GCAAGATCAT GATGTTGACT ACTTGTTTGG ACAGGTTGGC
ATTGATAAGC CTTTCGTTGA CTGGAGTGGT AACTGCGGTA ATCTGTCTGC GGCTGTCGGT
TCATTTGCTA TTAGCAGTGG CTTAGTTGAT GCTAGTCGAG TTCCCGATAA TGGCATCGCT
GTGGTGCGAA TTTGGCAAGC AAATATCAGT AAAACCATTA TTGCTCATGT TCCCATTACG
GATGGTGAAG TGCAGGAAAC CGGTGACTTT GAGCTCGATG GCGTCACTTT TCCAGCTGCC
GAAGTGCAGG TTGAATTTAT GGACCCCGCC GATGGTGATG GCTCCATGTT TCCAACGGGG
AACCTAGTGG ATGAGTTAGC CCTACCTACC GATGTTATTG CATCAGGTAA TGTTAAAGCG
ACAATGATCA ACGCTGGGAT CCCGACGATC TTTATCAATG CAAGCGATCT TGGTTATACC
GGTGCAGAGC TTCAAGATGA CATTAATAGT GATGCCGAGG TCCTTAAGCG CTTTGAAACA
ATCCGAGCTC ATGGCGCCGT TAAAATGGGG CTTATTAGCC ATATTGATGA AGCGGCAAGC
AGGCAACATA CACCTAAGGT GGCCATCGTT GGCAAGGCTT GTGATTACAT CTCTTCAAGT
GGCAAAAGGG TTCTATCGAC TGAGATAGAC TTAAATGTTA GGGCGCTATC GATGGGGAAA
CTGCATCATG CCATGATGGG CACTGCGGCT GTTGCCATTG GAACTGCGGC CGCGATCCCC
GGCACGCTAG TGAATATTGC AGCTGGTGGT GGCGAACGTG AGTCTGTTCA TTTCGGCCAT
CCATCAGGTA CATTGCGTGT GGGAGCTGAG GCTAGATGTA TTGATAATGA GTGGCGCGTA
ACTAAGGCCG TCATGAGTAG AAGCGCACGC GTATTAATGG AAGGACGGGT GAGGGTGCCT
GGTGATACGC TTAGTTAG
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| Protein sequence | MLQDEKGKTV FSPQIKVPAT YMRGGTSKGV FFNLEDLPAQ AKIAGKARDA LLLRVIGSPD
PYGKQTDGMG GATSSTSKTV IISKSRQQDH DVDYLFGQVG IDKPFVDWSG NCGNLSAAVG
SFAISSGLVD ASRVPDNGIA VVRIWQANIS KTIIAHVPIT DGEVQETGDF ELDGVTFPAA
EVQVEFMDPA DGDGSMFPTG NLVDELALPT DVIASGNVKA TMINAGIPTI FINASDLGYT
GAELQDDINS DAEVLKRFET IRAHGAVKMG LISHIDEAAS RQHTPKVAIV GKACDYISSS
GKRVLSTEID LNVRALSMGK LHHAMMGTAA VAIGTAAAIP GTLVNIAAGG GERESVHFGH
PSGTLRVGAE ARCIDNEWRV TKAVMSRSAR VLMEGRVRVP GDTLS
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