| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2482 |
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| Symbol | |
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| ID | 6116757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3029215 |
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| End bp | 3029841 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633990 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_001760854 |
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| Protein GI | 170726828 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000211708 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000303985 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAAAAA CTTTAACCGC GCTGATGCTA AGCTTGCCGC TATTGACTCC TCATATGGCT
TTTGCTGATG AGTCATCAGT GTTAAAAGCA AAATTGACCG AAATAGCCAC ACTTAAAGCT
AAGTTTGAGC AAACGGTTAC AGACATCAAT AACAAACAGA TCCAGAAAGG AAGCGGCATC
TTTGCATTGG CTTATCCGAA TCAATTTTAC TGGCATCTCA CTGCGCCAGA TGAATCTTTG
ATTGTTGCAG ATGGTACTGA TGTATGGATC TATAACCCCT TTGCGGAGGA GGTCTCTGTG
ATGGACCTCA ATCAAGCGAT CAGTGCTTCT CCAATTGCAC TTTTAGTTCA CAGAGATGAG
GAGACCTGGT CTCAATACTC GGTAACCAGT GATAATGGCT GTTTCAATAT TAAGCCTAAA
AGTATCGATG CAGGAGTTGA GTCTGTTAAG GTCTGTTTTG ATGACAAGAC ATTGACCGAG
ATGGTATTGC AAGATCAGCA GGGCAATGTC AGCCAGTTTA CACTCTCTGA GCAAACAGCC
ATTGATGATG CTGAGCGTGC TATGTTCAAA TTTACCGTCC CAGATGATGT TGATATCGAT
GACCAACGTC TCAATGCGAT CAATTAA
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| Protein sequence | MRKTLTALML SLPLLTPHMA FADESSVLKA KLTEIATLKA KFEQTVTDIN NKQIQKGSGI
FALAYPNQFY WHLTAPDESL IVADGTDVWI YNPFAEEVSV MDLNQAISAS PIALLVHRDE
ETWSQYSVTS DNGCFNIKPK SIDAGVESVK VCFDDKTLTE MVLQDQQGNV SQFTLSEQTA
IDDAERAMFK FTVPDDVDID DQRLNAIN
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