| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2463 |
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| Symbol | |
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| ID | 6116737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3008716 |
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| End bp | 3011166 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633970 |
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| Product | peptidase S16 lon domain-containing protein |
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| Protein accession | YP_001760835 |
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| Protein GI | 170726809 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.572002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAC TCCCGATTAG TTCTCCTCTT AGCAGTGACC AGCTTTACCG TCAATCCACT
CTCAATAACC TTGCGCCTGA ATGTAAGTCA ACAAAACACC TAACGCCACT CGATGAAATT
GTGGGTCAAG AGCGTGCCCA GCAGGCTGTT GAGTTTGCCA TGTCAATGAA AGACAAGGGC
TACAACATCT ATGCAATTGG CCGTAATGGC TTAGGGAAGC GCACTATGGT AATGCGCTAT
CTCAATCGTC ATGAGCCGAA TGGTCATGGC CATACGCTTT ACGATTGGTG CTATGTCAAT
AACTTCGATG AAGCGCGTAC GCCCAAAGTG CTTAAAGTGC CCGCAGGTAT GGGCACTAGT
TTAAAGAAAG ATGTAGAAAA GCTTATGGTG CGTCTGGTTA AAGCCTTGCC TCTAGCCTTT
GACAATGAAA TGTACTACTC ACGAGCCGAG AAACTTAAAA GTCTATTGGC CGGAAAACAG
GAAGCGGCAC TACAAGGACT CACTACTGAA GCTAAAGAAT CTAATGTGAG TTTAACCATC
ACTCCTCAGG GCAGTTATGA ACTTGTGGCG ATGAATGGCG AAGAGCCCTA TACCGAAGAG
AGTTTTGCTG CGCTCACCCC CAAGGAGCAA AATCAGCTTG AGACTAATAT CACTGAACTT
GAGTCAAAGC TTAGAGTGAT TGTCAGACAG TTCACTGTTT GGGAGGAGGA GTACACAGAT
AAGCAGCAAA AGCAGGATGA AGTTGTTGCT CAAGATGTGT TATCACACTT AACCGACGAG
CTAAAAGAGA AATATAGCGA CCAAGCGTCA ATCAAAAGCT ACCTTGCCAA TATGCACACG
GATATCTTAG ATAACTTAGA TCTCTTTCTG GAGGACAACG AAGAGCAACT AGCCCTCTCC
TACGCCTCCT TAGCTAAGAA GATGCCCCGC CGCTATCAGA TCAATGTATT GATCCATCAA
GATGAAGGCA AGATGCCGAT CGTCATCGAA GAGACGCCTA ACTACCACAG CATCTTTGGT
TATATAGAGA ATGCGACCTT TAAGGGCACC ATATTTTCTG ACTTCTCACT GATCCGTCCT
GGCAGCCTGC ATAAGGCCAA TGGCGGTGTC TTAATGATAG ATGCGGCTAA GGTACTGGAG
CAGCCCTATG TATGGGATGG CCTAAAACGT GCGCTGCGCT CACGCAAGCT AAGCCTTAGT
TCTCTAGAGC GTGAAGTGAC ACTCTCTGGC ACTATCTCTC TCGATCCTGA AGCAATCCCC
TTAGACGTGA AGATAATCCT ATTTGGGGAT TATCAGACCT ATCAACTACT GCAACACTAT
GATCCTGAGT TCGGAGAGCT CTTTAGGGTT ACTGCAGACT TTGAGGACGA GATGCCAAGA
ACCGATAAAT CTGAAGCTCA ATATGCCCAG TTTATCTCCA GTATCGTTCA CGATAATAAG
ATGCTGCACT GCGACAGAAA TGCCATAAAG CGGATTATCG AGTTTAGTTC ACGCCAAGCT
GATCACCAAA ATAAGTTGTC TCTCCACTCG GCTGACATTG CAAACTTGCT GCGGGAGTCT
AACTACTGCG CCCGTGCAGC CAATGCCAAT ATGATCCGAG TCGGTCATGT TGAACAGGCA
CTACATAATC ATGAGCTTAG GGTTTGTCGC CTCAAAGACA ACGTCATGCA GAGCTTTGTT
AACGGAACAA CGCTGATAAG TACCCAAGAT AATGTGGTAG GACAGGTCAA TGCTCTCTCG
GTGATCAGCA CATCCAATCA TCAATTTGGT GCACCTAACC GCATTACAGC AACCACAGCA
TTTGGCGAAG GCAAAGTATT TGATATTGAA CGCAAGGTCG ATTTAGGTGG CAGCATACAC
TCAAAAGGAG TGATGATCCT CTCAGCGTAT CTGGCATCAA TTCTGGGGAA AACAGCAAAG
ATCCCACTCA CAACCCATAT CACTTTTGAG CAGTCCTATG GTGGCGTAGA TGGCGATAGC
GCTAGTATGG CAGAGCTTTG TGCCATTATC TCCGCTTTCT CTGAACTGCC TATTAGGCAA
GATATCGCCA TTACAGGCTC AATGAATCAG TTTGGTGAAG CTCAGCCTAT TGGTGGTGTA
AACGAGAAGA TAGAGGGTTT CTTCGATGTC TGTGTGATTA AGGGGCGCAC TTCCACTCAA
GGAGTGATCA TTCCGCAATC AAATGTGCAG AACCTGATGT TACGCAGTGA TATTGTCGAT
GCGGTCAAGA AGGGACAATT TAATATCTGG GCCATTGAGC ATGTTACCCA AGCTATTGAG
ATCTTAACAG GATATAGCGC AGGTCTCGCC AATTTACATA GCGGCGTCAA TGGCACTACG
ACTATGGGTC AGCTTGAGCA CCCCAGCGAT TCCATTTTTG GACTGGCCCA ATCTCGCTTA
AACCTACTTA GGCTTGATAA GCCTTCACAG CCTGAAGAGT GTAAACATTA G
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| Protein sequence | MSKLPISSPL SSDQLYRQST LNNLAPECKS TKHLTPLDEI VGQERAQQAV EFAMSMKDKG
YNIYAIGRNG LGKRTMVMRY LNRHEPNGHG HTLYDWCYVN NFDEARTPKV LKVPAGMGTS
LKKDVEKLMV RLVKALPLAF DNEMYYSRAE KLKSLLAGKQ EAALQGLTTE AKESNVSLTI
TPQGSYELVA MNGEEPYTEE SFAALTPKEQ NQLETNITEL ESKLRVIVRQ FTVWEEEYTD
KQQKQDEVVA QDVLSHLTDE LKEKYSDQAS IKSYLANMHT DILDNLDLFL EDNEEQLALS
YASLAKKMPR RYQINVLIHQ DEGKMPIVIE ETPNYHSIFG YIENATFKGT IFSDFSLIRP
GSLHKANGGV LMIDAAKVLE QPYVWDGLKR ALRSRKLSLS SLEREVTLSG TISLDPEAIP
LDVKIILFGD YQTYQLLQHY DPEFGELFRV TADFEDEMPR TDKSEAQYAQ FISSIVHDNK
MLHCDRNAIK RIIEFSSRQA DHQNKLSLHS ADIANLLRES NYCARAANAN MIRVGHVEQA
LHNHELRVCR LKDNVMQSFV NGTTLISTQD NVVGQVNALS VISTSNHQFG APNRITATTA
FGEGKVFDIE RKVDLGGSIH SKGVMILSAY LASILGKTAK IPLTTHITFE QSYGGVDGDS
ASMAELCAII SAFSELPIRQ DIAITGSMNQ FGEAQPIGGV NEKIEGFFDV CVIKGRTSTQ
GVIIPQSNVQ NLMLRSDIVD AVKKGQFNIW AIEHVTQAIE ILTGYSAGLA NLHSGVNGTT
TMGQLEHPSD SIFGLAQSRL NLLRLDKPSQ PEECKH
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