Gene Swoo_2449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2449 
Symbol 
ID6116723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2995967 
End bp2997130 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content44% 
IMG OID641633956 
Producthypothetical protein 
Protein accessionYP_001760821 
Protein GI170726795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATA TCAATAATAG CATTCAATCA TCAGCAGAAT TAACTGCTTT TGTTAATCAC 
GAGATGCGAC AAGATGGTCG CTATCACCCA AATCTAGGAG GGGTAACACG AAGTGGAATG
GCGAATCACT TTCCTATGAC GATCATGAGC TTAGCAGCAC TTGGAGGCAG TGATACTGAT
ATCAAACGAT TTAAAAGTCA CTGGCCAGCA TCAAGGTATA GAAGCTTGAT TGAAGATCTG
GGGCTAAGAG ATACCGATTC AGTTACCCTG AATAATTGGC CAGATTATTT AGGGAAAGCT
GAGTTTTTAA TTGAATTTAA ACGGGTTTTT TTAGAGGGGC TCACTAATCT AGGCGCTGAG
CGATTTATAC ATCACGCACT TAATATCATG GCTGATTCAC TGCCGATGGG CTTGTTTCAT
CCTTTAATCA AATTAAGTTT CGCCAGGATG CAGGGCGATG ATGCCCTGAT AGCCGATGCA
TTGGCCTATT TTGCCATTCG CTATCAAGAC CTTTACGGCG AGCTGGGCTC GATGAAAACA
GATGAAGCCT CGAGTATTGA TGTTAGTGAT GTTAGTGATG TTAGTGATGG TCAGGATGCG
CTACTTACAT CCTGGGGCAG AGCCGCCCTT AAAGTTGAGA GTGGAGAGGT CAAGCTGTCA
ACTTCAGGGG CGAGTTTACC CGTTAGTGAA ACACTATGTG GCTCTAGTAC TGTGCATCAG
CTGGCTCTTA ATCAAGGCTT TTCGATCACT GAAGCAAACT TTTCTTGCCA GATAGCAGAG
ATCTGTAAAG CAGCCGCTGC ACTGTATCTC TATGAACCTG CTCTGACTAC GTTGCACGCC
GTCACCTCGG CTCAAGCGTT AGTGGATCTG ACATTATCGT TACAAAATAG CGATCGTAAA
TTGGCAGTAA AGTTGTGGCA AAGGTATTGG ATCTGGCTAA CGGGCCTCTA TCTGGAGAAA
GGCGCACCTA AGCTTACCTT CTCTGGCGTT TATTCAGCTG CAGATCTGCT ACCAGACTGG
AACAGTCTTG CTAAAACAGC GGTTAAGATT GATGAGGTTC ATGAGATCAA GATGGTATTT
TCGTGTAAGT GGCTGGCGCA AAATTTAGAA GATCATGAGA TCTATCGTAT TGTCGCTAGT
CAAGTTTTAG CTGAGTATGA GTAA
 
Protein sequence
MRNINNSIQS SAELTAFVNH EMRQDGRYHP NLGGVTRSGM ANHFPMTIMS LAALGGSDTD 
IKRFKSHWPA SRYRSLIEDL GLRDTDSVTL NNWPDYLGKA EFLIEFKRVF LEGLTNLGAE
RFIHHALNIM ADSLPMGLFH PLIKLSFARM QGDDALIADA LAYFAIRYQD LYGELGSMKT
DEASSIDVSD VSDVSDGQDA LLTSWGRAAL KVESGEVKLS TSGASLPVSE TLCGSSTVHQ
LALNQGFSIT EANFSCQIAE ICKAAAALYL YEPALTTLHA VTSAQALVDL TLSLQNSDRK
LAVKLWQRYW IWLTGLYLEK GAPKLTFSGV YSAADLLPDW NSLAKTAVKI DEVHEIKMVF
SCKWLAQNLE DHEIYRIVAS QVLAEYE