Gene Swoo_2445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2445 
Symbol 
ID6116719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2992557 
End bp2993840 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content46% 
IMG OID641633953 
Producthypothetical protein 
Protein accessionYP_001760818 
Protein GI170726792 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCAA CTGAAACAAA GGTGTTTTCT GAAGTCACTA CGCTGTTAGA TTGCTACCTC 
TGCGTTCGCA ACGATACCAC AGATATTTGT CAGCCATTGA CGATAGAAGA TCATGCCGTA
CAACCCAGCG CAGAGGTGAG CCCACCTAAA TGGCATCTAG GTCATACGAC TTGGTTTTTT
GAAGAACTCA TTCTAGTTCG TTTTATGCCA GAGTATGAAC GTTGGAATGA GCAATATCGT
GTGCTGTTTA ACTCCTACTA TAAGTCGGCG GGTGAACACT GGATACAGGG CGAGCGCGGT
AATCTATCAA GGCCTACGGT GGATGAGGTG TTGGCGTACC GTAGTTACGT CGATCATCAT
ATGCGCCTGT TTCTATCGAG TGAATGCCTG CAAGGTAAAG AGAGTGATGC TGAAATGGCA
TCAGAAGTCG CTGAGATACT TGAGATAGGT TTGCACCATG AGCAGCAACA TCAAGAACTG
CTCTATATGG ATATTAAGTA CATTCTTGGC GTGAATCCTA TCACAGTGAC CTACGATGAT
ACTCAACTAC TCAAAGCGGT TCCTGCAACG GGTGAACTCT GGACAGATTT TGATGAGGGA
GTATATCAGT TAGGCCACAG TGGCAGTGGC TTTGCTTATG ATAATGAATC TCCGCGGCAC
AAAACCTATA TCTATCCTTT CGCTATGGCC AAGCACACTG TCTCTAATGG TGAATATCTC
GAATTTATTG AAGCTCAAGG TTATCGTATC GCCAAATATT GGCTAAGTCA GGGCTGGGAT
TGGGTCACTG AAAACCGGAT AAAACATCCG CTGTACTGGC TACAGGAAGA TGGCGTTTGG
TATGAGTTCA CACTAAATGG TAAACATGCG TTAGACCTTA ACGCCCCTGT CACACATATC
AGTTACTTTG AAGCTGATGC TTTTGCCAGT TGGAAGGGGT GCCGTTTGCC TACAGAACAG
GAGTTTGAGA TCTACCTGCA ACAAAGTACG GCTGAGTACG GTCTTACAAA GACAGCTTGT
CATCCTAACG ATACAAGTGC TGATGTGGGG CAGGTGTGGT GTTGGACCCG TAGTCAATAT
TCAGCTTATC CCGGCTTTAA GCCCTATCAA GGTGTGCTAG CGGAGTACAA CGGCAAATTT
ATGTGTAATC AGTTTGTGTT AAAGGGCGGT TGTGTCGCAA CGCCACCAGG ACACTACCGC
CACACTTACC GCAACTTTTA CCAACCTCAC CAGAGGTGGA TGTTTTCTGG GATCCGATTG
AGTAAGGATA TTGAATGGAG ATAA
 
Protein sequence
MLSTETKVFS EVTTLLDCYL CVRNDTTDIC QPLTIEDHAV QPSAEVSPPK WHLGHTTWFF 
EELILVRFMP EYERWNEQYR VLFNSYYKSA GEHWIQGERG NLSRPTVDEV LAYRSYVDHH
MRLFLSSECL QGKESDAEMA SEVAEILEIG LHHEQQHQEL LYMDIKYILG VNPITVTYDD
TQLLKAVPAT GELWTDFDEG VYQLGHSGSG FAYDNESPRH KTYIYPFAMA KHTVSNGEYL
EFIEAQGYRI AKYWLSQGWD WVTENRIKHP LYWLQEDGVW YEFTLNGKHA LDLNAPVTHI
SYFEADAFAS WKGCRLPTEQ EFEIYLQQST AEYGLTKTAC HPNDTSADVG QVWCWTRSQY
SAYPGFKPYQ GVLAEYNGKF MCNQFVLKGG CVATPPGHYR HTYRNFYQPH QRWMFSGIRL
SKDIEWR