Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2432 |
Symbol | |
ID | 6116706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2980308 |
End bp | 2981132 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633940 |
Product | hypothetical protein |
Protein accession | YP_001760805 |
Protein GI | 170726779 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00928742 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAGCCAT TTGAGCATGC AAGAGAGGCT TTAGCCGATG CAGAGGTAGT TTTTATTGGG GCTGGTGCGG GTCTGTCTGC CTCAGCAGGG CTTGATTACA CTGATCAAAA GGCCTTTGCT GAACGTTTTC CTGGGATGTT GCAATATGGC TTTCGTTTTC AATATCAGCT TATGGGTTAT CCATTTGATG ATGAAGCTTT GAAGTGGGGT TATCTCGCTA CTGGCCTTAA CCATGTTTAT CATTCGCAGC AGACACAGGT TTATCAAGAT TTACTCAGCT TAGTCGACGA GCGTGACAGC TTTGTCATCA CTTCGAATGT CGATCGTTAT TTTCATAAAA ATGGGTTTGA TACTGCAAAT ATCTACACAC CCCAAGGCGA TTATGAACGC TTTCAGTGTA TGACGCCTTG CACAGATCTT GTGTGGGATG GTCGTGAGTC AGTTGCATCT ATGCTGCCTT ATATCAACCC TGAAACCCAG TATGTAGAGA ATAGAAGTAC ATTGCCGGTT TGTCCTAATT GCGGCGGTCC AGTTTTTATG AATGTACGTG GAGGTAGTTG GTTCATTGAG AAGCCATATG AGACTCAAGC AGATGCCATT AGTAACTGGC TCAATGATAA TCTCAATCGC AAAATGGCAA TTGTGGAGAT TGGTGCAGGG TTTAATACGC CAGGTGTTAT CCGTTTACCG TTAGAGAACA TCGCTAAGCA GTTACCAGAT GCAAGGTTAA TTCGGATCAG CAAAGAACAC GCTGATGGAC CAGTAGGAAC AATTTCTCTT CAAATGACAG CGGATGAAGC GCTTTCGAAA ATGATTTCCG GCTGA
|
Protein sequence | MEPFEHAREA LADAEVVFIG AGAGLSASAG LDYTDQKAFA ERFPGMLQYG FRFQYQLMGY PFDDEALKWG YLATGLNHVY HSQQTQVYQD LLSLVDERDS FVITSNVDRY FHKNGFDTAN IYTPQGDYER FQCMTPCTDL VWDGRESVAS MLPYINPETQ YVENRSTLPV CPNCGGPVFM NVRGGSWFIE KPYETQADAI SNWLNDNLNR KMAIVEIGAG FNTPGVIRLP LENIAKQLPD ARLIRISKEH ADGPVGTISL QMTADEALSK MISG
|
| |