Gene Swoo_2432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2432 
Symbol 
ID6116706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2980308 
End bp2981132 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content44% 
IMG OID641633940 
Producthypothetical protein 
Protein accessionYP_001760805 
Protein GI170726779 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00928742 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGCCAT TTGAGCATGC AAGAGAGGCT TTAGCCGATG CAGAGGTAGT TTTTATTGGG 
GCTGGTGCGG GTCTGTCTGC CTCAGCAGGG CTTGATTACA CTGATCAAAA GGCCTTTGCT
GAACGTTTTC CTGGGATGTT GCAATATGGC TTTCGTTTTC AATATCAGCT TATGGGTTAT
CCATTTGATG ATGAAGCTTT GAAGTGGGGT TATCTCGCTA CTGGCCTTAA CCATGTTTAT
CATTCGCAGC AGACACAGGT TTATCAAGAT TTACTCAGCT TAGTCGACGA GCGTGACAGC
TTTGTCATCA CTTCGAATGT CGATCGTTAT TTTCATAAAA ATGGGTTTGA TACTGCAAAT
ATCTACACAC CCCAAGGCGA TTATGAACGC TTTCAGTGTA TGACGCCTTG CACAGATCTT
GTGTGGGATG GTCGTGAGTC AGTTGCATCT ATGCTGCCTT ATATCAACCC TGAAACCCAG
TATGTAGAGA ATAGAAGTAC ATTGCCGGTT TGTCCTAATT GCGGCGGTCC AGTTTTTATG
AATGTACGTG GAGGTAGTTG GTTCATTGAG AAGCCATATG AGACTCAAGC AGATGCCATT
AGTAACTGGC TCAATGATAA TCTCAATCGC AAAATGGCAA TTGTGGAGAT TGGTGCAGGG
TTTAATACGC CAGGTGTTAT CCGTTTACCG TTAGAGAACA TCGCTAAGCA GTTACCAGAT
GCAAGGTTAA TTCGGATCAG CAAAGAACAC GCTGATGGAC CAGTAGGAAC AATTTCTCTT
CAAATGACAG CGGATGAAGC GCTTTCGAAA ATGATTTCCG GCTGA
 
Protein sequence
MEPFEHAREA LADAEVVFIG AGAGLSASAG LDYTDQKAFA ERFPGMLQYG FRFQYQLMGY 
PFDDEALKWG YLATGLNHVY HSQQTQVYQD LLSLVDERDS FVITSNVDRY FHKNGFDTAN
IYTPQGDYER FQCMTPCTDL VWDGRESVAS MLPYINPETQ YVENRSTLPV CPNCGGPVFM
NVRGGSWFIE KPYETQADAI SNWLNDNLNR KMAIVEIGAG FNTPGVIRLP LENIAKQLPD
ARLIRISKEH ADGPVGTISL QMTADEALSK MISG