Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2431 |
Symbol | |
ID | 6116705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2977318 |
End bp | 2978373 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641633939 |
Product | hypothetical protein |
Protein accession | YP_001760804 |
Protein GI | 170726778 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000383928 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTAAAAC CTTCTGACAT TAAAGATATA TTAAAAAAAA GAGGGGTGTA TTCATCTTCT AATGAGAAAA AAACACTGGG ACCAATATTG GTTAAAAGCG GAATATCTCC TGAAGAATTT GAATCGTTAA AGGAATCCAT TCAAACAAAA GAAGAAAACC CAAAGGTTCA AAGCCGAAAA CTAAAATGGG AAAGTGATGA TAGTCTAATA GAAGCTATTC CTCACAATTT TGACTTTTCA AATTTAGTAG ATGATCCTTT TGGGGTTCTT TCTATTGATA ATGCGCCAGT GTTTACAGTT GCAGGGGATG GTACTAACAC TAACCACTTA ATAGCTGAAG TCACATTAAA ACGAAATGAT AAAACAAAGA ATTTTGGTGA TGATGTTACT TATCACCAAT GCTCGATAGA GCTTCGAATT GATGATGATA AAAATGTGAG TTTGAATGTT TTAACAAAGC ATTCTTCAAA AGAAACCTTA AATTTAGTCA ATAAAGTTAC TAGGCGTATA CACAATCATT TGAAAGATAA CGGCTATGTA AGTAATGAAC CAATTGAAAA AATATTATTC GGAAATTTCA CTAATGAAAA TCGAATAGAT TTCCTTGTCG CAATGGCAAA ATCAAATGAA AAATATCTGT ATTACAAAGA TATGAAAAAA GTACATATGT CTCCAGATGA GGATGTGAAA GGAGTAGTCC CTACAGAGAT AGAGCTTTTC GAAAAAAAAG TAAATGACCT TATGTTCAAA GGAAAAAACC TAGATTCAAG TGTTTACTTG AAAAAAAATG CACTTAAAAA GCATATTAAA CTGTGTAGTG TTACTTCAAG ATATGAGCTT GATGATAATG AGCATCAAGG TAGTTGCTTA GTTCGAATTC ACTTTCCTGA ATTTGATGAT GATAGTGAAT TACTTATGGA AGTAGAGAAT TTAAATATAC AAAAAAAACT ACCTGCAGAA TTAAAGTCAG ATATAAAACT ACAAATACTA AAGTTTTTAG AAACTAAAAA AATGACCTTG TACACTAAGT ACTCAAAAAA GCAATCTAAC CCGTAG
|
Protein sequence | MVKPSDIKDI LKKRGVYSSS NEKKTLGPIL VKSGISPEEF ESLKESIQTK EENPKVQSRK LKWESDDSLI EAIPHNFDFS NLVDDPFGVL SIDNAPVFTV AGDGTNTNHL IAEVTLKRND KTKNFGDDVT YHQCSIELRI DDDKNVSLNV LTKHSSKETL NLVNKVTRRI HNHLKDNGYV SNEPIEKILF GNFTNENRID FLVAMAKSNE KYLYYKDMKK VHMSPDEDVK GVVPTEIELF EKKVNDLMFK GKNLDSSVYL KKNALKKHIK LCSVTSRYEL DDNEHQGSCL VRIHFPEFDD DSELLMEVEN LNIQKKLPAE LKSDIKLQIL KFLETKKMTL YTKYSKKQSN P
|
| |