Gene Swoo_2431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2431 
Symbol 
ID6116705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2977318 
End bp2978373 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content31% 
IMG OID641633939 
Producthypothetical protein 
Protein accessionYP_001760804 
Protein GI170726778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000383928 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTAAAAC CTTCTGACAT TAAAGATATA TTAAAAAAAA GAGGGGTGTA TTCATCTTCT 
AATGAGAAAA AAACACTGGG ACCAATATTG GTTAAAAGCG GAATATCTCC TGAAGAATTT
GAATCGTTAA AGGAATCCAT TCAAACAAAA GAAGAAAACC CAAAGGTTCA AAGCCGAAAA
CTAAAATGGG AAAGTGATGA TAGTCTAATA GAAGCTATTC CTCACAATTT TGACTTTTCA
AATTTAGTAG ATGATCCTTT TGGGGTTCTT TCTATTGATA ATGCGCCAGT GTTTACAGTT
GCAGGGGATG GTACTAACAC TAACCACTTA ATAGCTGAAG TCACATTAAA ACGAAATGAT
AAAACAAAGA ATTTTGGTGA TGATGTTACT TATCACCAAT GCTCGATAGA GCTTCGAATT
GATGATGATA AAAATGTGAG TTTGAATGTT TTAACAAAGC ATTCTTCAAA AGAAACCTTA
AATTTAGTCA ATAAAGTTAC TAGGCGTATA CACAATCATT TGAAAGATAA CGGCTATGTA
AGTAATGAAC CAATTGAAAA AATATTATTC GGAAATTTCA CTAATGAAAA TCGAATAGAT
TTCCTTGTCG CAATGGCAAA ATCAAATGAA AAATATCTGT ATTACAAAGA TATGAAAAAA
GTACATATGT CTCCAGATGA GGATGTGAAA GGAGTAGTCC CTACAGAGAT AGAGCTTTTC
GAAAAAAAAG TAAATGACCT TATGTTCAAA GGAAAAAACC TAGATTCAAG TGTTTACTTG
AAAAAAAATG CACTTAAAAA GCATATTAAA CTGTGTAGTG TTACTTCAAG ATATGAGCTT
GATGATAATG AGCATCAAGG TAGTTGCTTA GTTCGAATTC ACTTTCCTGA ATTTGATGAT
GATAGTGAAT TACTTATGGA AGTAGAGAAT TTAAATATAC AAAAAAAACT ACCTGCAGAA
TTAAAGTCAG ATATAAAACT ACAAATACTA AAGTTTTTAG AAACTAAAAA AATGACCTTG
TACACTAAGT ACTCAAAAAA GCAATCTAAC CCGTAG
 
Protein sequence
MVKPSDIKDI LKKRGVYSSS NEKKTLGPIL VKSGISPEEF ESLKESIQTK EENPKVQSRK 
LKWESDDSLI EAIPHNFDFS NLVDDPFGVL SIDNAPVFTV AGDGTNTNHL IAEVTLKRND
KTKNFGDDVT YHQCSIELRI DDDKNVSLNV LTKHSSKETL NLVNKVTRRI HNHLKDNGYV
SNEPIEKILF GNFTNENRID FLVAMAKSNE KYLYYKDMKK VHMSPDEDVK GVVPTEIELF
EKKVNDLMFK GKNLDSSVYL KKNALKKHIK LCSVTSRYEL DDNEHQGSCL VRIHFPEFDD
DSELLMEVEN LNIQKKLPAE LKSDIKLQIL KFLETKKMTL YTKYSKKQSN P