| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2420 |
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| Symbol | |
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| ID | 6116694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2964983 |
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| End bp | 2967361 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633928 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001760793 |
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| Protein GI | 170726767 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000019165 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000435833 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCACT GTGATTGTTT CCATTGTGGC GAGCCCGTTC AGACAGGGTC TCAATTTACA
ACACGTATCA ATGATAGCGA TGAGCTAATG TGTTGCCCAG GTTGCCAAGC TGTTTCTCAG
GCAATTATCG ATGCTGGGTT AACAAACTAC TATAAATTCC GCACTGAGCC TGGCAGTAAA
CAAACCGCAC TTGTTCCCGA TGAATTAAGC ACCTTTTCAG CCTTTGACCT ACCTGAAATT
CAGCAGGACT TTGTCTATAG CAAAAGTGAT ATCTCAACGG TTTCGCTCTC TATTGATGGG
ATCACGTGCG CTGCCTGTGC TTGGTTAATT GAGCACAAGC TGAAACATAT TGCCGGCATC
CAATCTATTG TGGTTAATAC GACAACCGAG AGAGCACAGG TCAGTTGGTT AACGGATCAG
ATTAAGCTCA GTGACATCTT AAATCACATT AGTCAGATTG GTTATCAGGC GGCCCCCTAT
CAAGTTGATG AGCAGGAGAA GCAGAGCAAA GAGAGTAGTC GTAAGTTTCT ATTAAGGCTT
GGTCTTGCTG GTTTTGCGAC GATGCAGGTG ATGATGTTTG CGCTTGCCCT GTATGCTGAT
TTCTTTACCG ATCTGGATAT TGAGTATCGT GACTACTTTC GCTGGGTGAG TATGATTTTC
GCCGCGCCAG TGGTTTTCTA TTCGGCCCAA CCTTTCTATT TTAGCGCCAT ACGCTCCATG
TTTAGCGGAC GGCTTAATAT GGACGTCTCT GTTTCCATCG CCATACTGGG CGCCTATGTC
GCCAGTTGTA TCGCAACTGT CAATGGAACC GGTGAAGTCT ATTTTGAATC CGTCAGCATG
TTCACCTTCT TTCTTCTACT GGGCCGTTAT TTTGAGCAAA ATGCTCGGCA GAAGGCGTCA
GTAAGCTCAA GTAACCTGCA TAAACTTATT CCAATAACGG CCCAGTTAGT CACTGAGGCA
GGGCCTGAAG AGGTGCCGGC AAAGCGCCTG AAGATTGGTG ATGTTATCTT GGTTAAGCCA
GGTGAAGTGA TCGCGGCTGA TGGCGTGATC TTAGAGGGAG AAACCTGCGT TAATGAAGCC
ATGTTAACTG GCGAGCAGAT GCCGGTATTG AAAGCATTGA ACCAAGAGGT GTTTGCTGGA
ACCATTAACG TGGATCATCC TGTTAAGGTC GAGGTAACTG CCATTGGACA AGATCAGTTA
GTTGCTGAGA TTATCCGTTT ACAGGAAGCG GCATCGAATA ATAAGCCTAA AGTTGCCCTG
TATGTTGATA CCATCTCAAA CTACTTTACC TGGACCATAC TGGCGATTGC GCTGATGACT
TACATCGTCT GGCGTATCTA CTGGCCAGAA GATGCATTTT GGGTCACGCT AGCCGTATTA
GTCGCAACTT GCCCTTGTGC TCTAGCCCTT GCTACCCCAA CCGCAGTCAC ATGCGCTACC
GGTATTTTTA CCCGTATTGG TGTTATCGCT CGTAAGCCAG GCGTATTTGA AAAGTTGACC
AATATCGAGC AGGTCGTTTT TGATAAGACG GGCACCCTCA CCTGTGGCAC GCTCACCGTT
GAGGATGTGA CCCTCTATAA TCAAGCTATT AAGCGAGAGG TTTTATCTAT TGCAGCTGCA
TTAGAGAGTG CTTCATTGCA TCCCATAGCC AGGGCATTTG AACCCTTTAG ACGCAGTGAG
ATACAAGCCA CCGAGCAGCA AAGTACTGTT GGTGGAGGTT TAAGCGGCGT TATTGGCGGG
GTTAAGTATC AGATTGGCAG TGCTGAGTTT GTTGGCGTGG ATAACGATCT ATCTCAATCA
GTTTACCTGA CTCAAGAGGG GCTATTACTG GCAAAATTCA CGCTTGTAGA TGCCATTAGA
GAGGATGCGG TTGATACGGT CAAGACGCTT AAGAGTAATG GCTACAAGTT AACCATTGCC
AGTGGAGATA GCTCAATTCA TGTGGATGAG ATTGCCCGTC GAGTGGGAAT TGATGAGGTT
TATAAAGGTT TAAAACCAAG TGATAAACTC TCCCTTGTGC AAAAGTTACA AACTAAGCGC
TCTGTGGTCA TGTTTGGTGA TGGTATTAAT GATGCGCCTG TGCTGGCTGG GGCTAATCTC
TCGGTCGCTA TGGGTAGTGG CTCGGCAATT ACTAAAAACA GCGCCGATCT TATTTTACTT
GGCGATCAGC TTTCACGATT TAATGATGCT GTTGATGTTG CTAAGTTGAC CAATAGAGTC
ATTAAACAAA ATTTGTATTG GGCGCTTGGC TACAACCTGT TTATAATCCC ACTGGCCGTG
ACCGGTCACG TATTACCTTA TATCGCTGCC CTAGGAATGT CAGCCAGTTC TCTCATTGTT
GTAGCTAACA GTCTAAGACT CTTAAGGGTT CGTTTATGA
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| Protein sequence | MKHCDCFHCG EPVQTGSQFT TRINDSDELM CCPGCQAVSQ AIIDAGLTNY YKFRTEPGSK
QTALVPDELS TFSAFDLPEI QQDFVYSKSD ISTVSLSIDG ITCAACAWLI EHKLKHIAGI
QSIVVNTTTE RAQVSWLTDQ IKLSDILNHI SQIGYQAAPY QVDEQEKQSK ESSRKFLLRL
GLAGFATMQV MMFALALYAD FFTDLDIEYR DYFRWVSMIF AAPVVFYSAQ PFYFSAIRSM
FSGRLNMDVS VSIAILGAYV ASCIATVNGT GEVYFESVSM FTFFLLLGRY FEQNARQKAS
VSSSNLHKLI PITAQLVTEA GPEEVPAKRL KIGDVILVKP GEVIAADGVI LEGETCVNEA
MLTGEQMPVL KALNQEVFAG TINVDHPVKV EVTAIGQDQL VAEIIRLQEA ASNNKPKVAL
YVDTISNYFT WTILAIALMT YIVWRIYWPE DAFWVTLAVL VATCPCALAL ATPTAVTCAT
GIFTRIGVIA RKPGVFEKLT NIEQVVFDKT GTLTCGTLTV EDVTLYNQAI KREVLSIAAA
LESASLHPIA RAFEPFRRSE IQATEQQSTV GGGLSGVIGG VKYQIGSAEF VGVDNDLSQS
VYLTQEGLLL AKFTLVDAIR EDAVDTVKTL KSNGYKLTIA SGDSSIHVDE IARRVGIDEV
YKGLKPSDKL SLVQKLQTKR SVVMFGDGIN DAPVLAGANL SVAMGSGSAI TKNSADLILL
GDQLSRFNDA VDVAKLTNRV IKQNLYWALG YNLFIIPLAV TGHVLPYIAA LGMSASSLIV
VANSLRLLRV RL
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