| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2409 |
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| Symbol | |
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| ID | 6116683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2954500 |
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| End bp | 2956164 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633917 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001760782 |
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| Protein GI | 170726756 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0704611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000109312 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGAAAG TCTGGTTAAA ACACTATCCA GAAGGTGTAC CTGAGCAGAT AGACGTAAGT
AAATACGAGA ATGTGCTAGA AATCTTCGAA AGAAGTGTCA GTCAATACGC TGAAAATAAT
GCGTATATTA GCATGCATAC GCGAATGACT TATGCTGAAT TAGATAGAAA AACTCGGGAT
TTTGCCGCTT TTCTTCAACA TGATCTTGGC ATGAAAAGAG GGGAGCGATT CGCGATTATG
CTTCCTAATG TACTGCAATA CCCTGTTGCC GTATTTGGGG CTATTCGAGC AGGTTTGGTT
GTTGTAAACG TAAATCCTTT GTATACGCCA AAAGAGCTGA AACATCAGTT AAATGATTCT
GAAGCCACGG GGATACTCGT TGTCGAAAAC TTTGCTAGTG TGCTATCCAA GGTAATTGAC
GACACATCTG TCAATCATGT TATTACGACA CAAATTGGTG ATTTACTAGA TGGTATGAAG
AGCGTGCTAA TCAATACAAT GATTAAGCGC GTTAAAAAAA TGGTACCTGA GTTTTCTCTA
CCGCACGCCA TTAAATTCAA TGCAGCGCTC AAACGCGGTA AGAAACTACC GCTGAATACC
GTTTCTCCTC AAGCTAGTGA CCTGTTGATG CTGCAATATA CAGGTGGAAC GACTGGCGTT
GCAAAAGGGG CTATGCTGAG TCACCGTAAC GTCGTGGCTA ACATGCTTCA ACAGATTGCC
ATGGTGGAAC CTTTCATTGA GAAAGGTAAC GAGATGATTG TAACCGCCTT GCCCCTCTAT
CACATATTCG CTTTCAGCTG TAACTGTTTA GGATTTATGG CAAAAGGCGG CACCAATCTT
CTGATTGCAA ATCCGAGGGA TCCCAAGCTA TTTGCAAAGA CAATCAGTAA GTATCCGGTC
ACGTTCTTTG CTGGTGTAAA TACCTTGTTT GTTAGCCTAA TGGAAGAACC CGAGTTTCAT
AAGATTGACT TCAGTACTTG GAAGCTGACA TTTGCCGGTG GTATGGCGAC GCAGAGGCCA
GTCGCTGAAA GGTGGCAAAA AATGACTAAC GGCCCCTTGT TAGAGGGGTA TGGATTGACG
GAGTGTTCAC CTGCTGTTTC AACCAACCCG TTTAACATCA AATCCTTTAA CGGATCGATT
GGTGTGCCAA TGTGTAATAC CGAGGTGAAG ATCCTTGATG AAGACGGCAA CGAATTGGGC
GTTGGCGAAC CCGGTGAGAT GTGGGTTAGA GGTCCTCAGG TGATGGAAGG CTATTACAAT
CGCGCTGAAG CAACCAATGA AGTAATCAAG GATGGGTGGT TGGCGACCGG AGACGTTGCG
AAAGTTGACG ACGATGGATT CATTTATATC GTAGATCGGA AAAAAGACAT GATTTTAGTG
TCTGGTTTTA ACGTATTTCC TAATGAGATT GAAGAAGTTG TTGCCATGAT TGATTCTGTA
TTAGAGGTAG CGGCAATAGG CGTACCGTGT GAAAAAATGG GCGAGAAAGT GAAGCTTTTT
CTCGTAACCA ATGATGGAAA GCTAGACAGA GATGAAGTTA TGGACCACTG TCGGAAGCAT
TTGACAGCCT ATAAGCTCCC GCGTGAATTT GAGCTGAGGG ATGAATTGCC TAAAACCCCT
GTAGGTAAAA TTCTACGTAA AGAATTAAGG GTTCAATCGA CATAA
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| Protein sequence | MEKVWLKHYP EGVPEQIDVS KYENVLEIFE RSVSQYAENN AYISMHTRMT YAELDRKTRD
FAAFLQHDLG MKRGERFAIM LPNVLQYPVA VFGAIRAGLV VVNVNPLYTP KELKHQLNDS
EATGILVVEN FASVLSKVID DTSVNHVITT QIGDLLDGMK SVLINTMIKR VKKMVPEFSL
PHAIKFNAAL KRGKKLPLNT VSPQASDLLM LQYTGGTTGV AKGAMLSHRN VVANMLQQIA
MVEPFIEKGN EMIVTALPLY HIFAFSCNCL GFMAKGGTNL LIANPRDPKL FAKTISKYPV
TFFAGVNTLF VSLMEEPEFH KIDFSTWKLT FAGGMATQRP VAERWQKMTN GPLLEGYGLT
ECSPAVSTNP FNIKSFNGSI GVPMCNTEVK ILDEDGNELG VGEPGEMWVR GPQVMEGYYN
RAEATNEVIK DGWLATGDVA KVDDDGFIYI VDRKKDMILV SGFNVFPNEI EEVVAMIDSV
LEVAAIGVPC EKMGEKVKLF LVTNDGKLDR DEVMDHCRKH LTAYKLPREF ELRDELPKTP
VGKILRKELR VQST
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