| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2401 |
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| Symbol | |
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| ID | 6116675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2943265 |
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| End bp | 2944551 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633909 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001760774 |
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| Protein GI | 170726748 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000579977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00170597 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCATTAC ATAATGTATG TTACACAACC TTAAAACAAC AGGAGAGCGA TGTGTCTTTA
GTCCAAAGTA AAAAATTAAT ATTAGGTGCT TTAGGTGCTT TAGTTGCTGC TGTGCCGAGT
GTCGGTTTAG CTAGCGGGTT TGATCGTGGT GTTGTACCTC CAGACTTTTT GTATGAAAAA
GATGATATTG TCCAAGTGTC TCTTGCTGTT GTTAAGCCTG ACGTAAGGGG CAAGATTGTT
GCGTCACCAA AAGCGACTTT AGAGGCACAA GCCTCCTTTT TGCAGGGTCA AGCTGCAGCA
AATCCAGGCA ATTTGGCGTT ACAGCAGCAA GCCGCTCAAG TGACGTATCT AGCGAGTAAG
GCTCCTGCAG TTGGGCAAGA AACAGGTAAT TTGCCTGGGG ACTATGAGCG TAAGGGTATT
TCTCTGAAGA AAACGATTAA TGATGATTTC ACTATTGGCT TACAAGTGAC TCAGCCGGCT
GGACTCGATA TTGCTTATCC TGACGAAATA TTTGGTGTGT ATGTAGAGAC TGAAATAACT
TCCTTGGATC TGCTTTTGAA GTATCAAGTT AACGACGTAT TTAGTGTTTT TGGTGGTCCG
CGTATTCAAC AAAACTCTAG CGGCGGATTT GCTAATGATT TGAATGGTGA GTTCCACTAC
CAGGGGACGA CCGAAGTTGG CTATATGGTT GGAGCTGGGT ATAAAAACCC TGACCTTCAT
ACACAAGTAC TCGTTAGTTA TACCTCAGAC ATCAAGCACA CGATGGATGC GACTCCGATT
TCTGGAAGTG GGCCGGTTGC TGATGGTGTA ATCGCTACGG ATTACGAAGG TGAGGTTTAT
ATAAATACGC CGGACCATTT TCAAGTTGCA ATTAAGCAGC CACTAAGTGA TAAATCCGCG
CTTATTGCTT CTTACCGAAA ATCTGGTTGG TCCCAAGCAA ACATAGAAAC TAATCTGGCT
GGCTTTGAGT CGCTTACAGA TTTTAAAGAT GTTGAAGCAT ATACCTTGGG CTATGGCCGC
AAACTGACAG AAGAAGTGGC TTTGTTTGCC ACGTTACTTC ATCAAACGGG TGAGGCGAAT
GTATTTGGCC CGGTGAACAA TCGAACCGGG GCAGCACTAA TTGCGCAGTT TAAAGTCGAT
AGATTTAAGG TTGAAACAGG CGTTACTTAT TTTGATTTAG AGGACGCAGA AACAACTATC
CCGATGGGGG CCGCAGGCGA TGTTGTCACG AAGTTTGAGG GTAATTCTGC GTTAGCCTAT
ACCTTCCGTT TGGGCTATTA CTTTTAG
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| Protein sequence | MSLHNVCYTT LKQQESDVSL VQSKKLILGA LGALVAAVPS VGLASGFDRG VVPPDFLYEK
DDIVQVSLAV VKPDVRGKIV ASPKATLEAQ ASFLQGQAAA NPGNLALQQQ AAQVTYLASK
APAVGQETGN LPGDYERKGI SLKKTINDDF TIGLQVTQPA GLDIAYPDEI FGVYVETEIT
SLDLLLKYQV NDVFSVFGGP RIQQNSSGGF ANDLNGEFHY QGTTEVGYMV GAGYKNPDLH
TQVLVSYTSD IKHTMDATPI SGSGPVADGV IATDYEGEVY INTPDHFQVA IKQPLSDKSA
LIASYRKSGW SQANIETNLA GFESLTDFKD VEAYTLGYGR KLTEEVALFA TLLHQTGEAN
VFGPVNNRTG AALIAQFKVD RFKVETGVTY FDLEDAETTI PMGAAGDVVT KFEGNSALAY
TFRLGYYF
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