Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2398 |
Symbol | |
ID | 6116672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2939094 |
End bp | 2940320 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641633906 |
Product | glutathione S-transferase-like protein |
Protein accession | YP_001760771 |
Protein GI | 170726745 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.416741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.054689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAGC AAAATAATAC AACTTTGATA GAAAAGGATT TGCACGAAAA AAGCAAAGTT TTGCTCTCTG AGCAAGAGGA TCATTATCGA ATTTTTCAAA CGCAAATGTC CCCTTATAGT CATAAAGTCA TGACCTATAT GAACTATAAG GGCATCCCTT ACAAACGCGT GCATGCCAAT CAAATGGATA TATCGTGGGC CATTAATAAT GTTGGCCAGT CTATTGTACC TGTTCTGATC ACCCCTGATG ATCAAATCAT GCAAGACTCC ACTCCCATAC TTGAGTACTT AGAAAAGCAA TATCCCCAGC CTGCGGCTAT TCCAAATAGC CCGTTGCTTT CATTTTTAAT GTGGCTGTTA GAGGATTTTG CAGACGAATA TTTGCAACGT TTGCAAATGC ACACCCGCTG GGGAAATAAC CTCAATATAC AAACGGCCTC CCATAAAATT TCCAGAAACT TCGCCTATGG TGTGCCTAAG TTGGATATTA AAAGTCTGGC TCCTGTTATC CAAGCGCGAC AAAAAAAGAA CGACTCGCTG TTAGGTTTAG AAGGGGATAA ACAAAGACAG AATCTAGATC AACAGGTTTT AGATCTCTTG TGCATTTTAG ATGCGCGCCT GGAAGAATCT CAGTTTTTAT TGGGGAATCG TCCATCCATG GCCGACTTTG CTTTTTACGG GCCATTAATG ATTCACCTTT ATAACGATCC ACAATCAAAT CATATTTTAG AAACTAACGC CCCTCGAGTG TGTAACTGGC TCTTTACCAT TCAAGAGCTA GGAGATACCC GAGGCTGCGT TGGGCAAACG GAATTGGGTG AATGGATAGA TAGTGAAACA GACCTCCCCC CCTCTTTACT CGAATTGCTT AAGTTTGTAT CACAAACCTA TATCCCATTG GGAAGAGCAA CTGCTAAAGC ATCAGTGCTA CGAGAAAAAC ATTTTGAGGC AAGCGTTTAC GGTATTAAGA CAACCTTTGG CGCCAGTCAT TATAAAGCGT GGGCATTTGA GCAAACCCAA TTGAGATATC GGGCGTTAAC GAATGATACT AAAACCAAAA TCGATGGCAT TTTGCTAGAG ACCGGCATCT TACCGGGATT ATTGGAAGAT GGTGTATTGC ATAATGGCTT GTACGATGGC TTCTCTCCAC CCTTCGTTAA AGATGGCATT CCCGACGCAC GCATAAAGCA TTTAAAGGAA AAACAACAGC AAAAGAAGGT GGTGTAG
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Protein sequence | MQEQNNTTLI EKDLHEKSKV LLSEQEDHYR IFQTQMSPYS HKVMTYMNYK GIPYKRVHAN QMDISWAINN VGQSIVPVLI TPDDQIMQDS TPILEYLEKQ YPQPAAIPNS PLLSFLMWLL EDFADEYLQR LQMHTRWGNN LNIQTASHKI SRNFAYGVPK LDIKSLAPVI QARQKKNDSL LGLEGDKQRQ NLDQQVLDLL CILDARLEES QFLLGNRPSM ADFAFYGPLM IHLYNDPQSN HILETNAPRV CNWLFTIQEL GDTRGCVGQT ELGEWIDSET DLPPSLLELL KFVSQTYIPL GRATAKASVL REKHFEASVY GIKTTFGASH YKAWAFEQTQ LRYRALTNDT KTKIDGILLE TGILPGLLED GVLHNGLYDG FSPPFVKDGI PDARIKHLKE KQQQKKVV
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