Gene Swoo_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2398 
Symbol 
ID6116672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2939094 
End bp2940320 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content42% 
IMG OID641633906 
Productglutathione S-transferase-like protein 
Protein accessionYP_001760771 
Protein GI170726745 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.416741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.054689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAGC AAAATAATAC AACTTTGATA GAAAAGGATT TGCACGAAAA AAGCAAAGTT 
TTGCTCTCTG AGCAAGAGGA TCATTATCGA ATTTTTCAAA CGCAAATGTC CCCTTATAGT
CATAAAGTCA TGACCTATAT GAACTATAAG GGCATCCCTT ACAAACGCGT GCATGCCAAT
CAAATGGATA TATCGTGGGC CATTAATAAT GTTGGCCAGT CTATTGTACC TGTTCTGATC
ACCCCTGATG ATCAAATCAT GCAAGACTCC ACTCCCATAC TTGAGTACTT AGAAAAGCAA
TATCCCCAGC CTGCGGCTAT TCCAAATAGC CCGTTGCTTT CATTTTTAAT GTGGCTGTTA
GAGGATTTTG CAGACGAATA TTTGCAACGT TTGCAAATGC ACACCCGCTG GGGAAATAAC
CTCAATATAC AAACGGCCTC CCATAAAATT TCCAGAAACT TCGCCTATGG TGTGCCTAAG
TTGGATATTA AAAGTCTGGC TCCTGTTATC CAAGCGCGAC AAAAAAAGAA CGACTCGCTG
TTAGGTTTAG AAGGGGATAA ACAAAGACAG AATCTAGATC AACAGGTTTT AGATCTCTTG
TGCATTTTAG ATGCGCGCCT GGAAGAATCT CAGTTTTTAT TGGGGAATCG TCCATCCATG
GCCGACTTTG CTTTTTACGG GCCATTAATG ATTCACCTTT ATAACGATCC ACAATCAAAT
CATATTTTAG AAACTAACGC CCCTCGAGTG TGTAACTGGC TCTTTACCAT TCAAGAGCTA
GGAGATACCC GAGGCTGCGT TGGGCAAACG GAATTGGGTG AATGGATAGA TAGTGAAACA
GACCTCCCCC CCTCTTTACT CGAATTGCTT AAGTTTGTAT CACAAACCTA TATCCCATTG
GGAAGAGCAA CTGCTAAAGC ATCAGTGCTA CGAGAAAAAC ATTTTGAGGC AAGCGTTTAC
GGTATTAAGA CAACCTTTGG CGCCAGTCAT TATAAAGCGT GGGCATTTGA GCAAACCCAA
TTGAGATATC GGGCGTTAAC GAATGATACT AAAACCAAAA TCGATGGCAT TTTGCTAGAG
ACCGGCATCT TACCGGGATT ATTGGAAGAT GGTGTATTGC ATAATGGCTT GTACGATGGC
TTCTCTCCAC CCTTCGTTAA AGATGGCATT CCCGACGCAC GCATAAAGCA TTTAAAGGAA
AAACAACAGC AAAAGAAGGT GGTGTAG
 
Protein sequence
MQEQNNTTLI EKDLHEKSKV LLSEQEDHYR IFQTQMSPYS HKVMTYMNYK GIPYKRVHAN 
QMDISWAINN VGQSIVPVLI TPDDQIMQDS TPILEYLEKQ YPQPAAIPNS PLLSFLMWLL
EDFADEYLQR LQMHTRWGNN LNIQTASHKI SRNFAYGVPK LDIKSLAPVI QARQKKNDSL
LGLEGDKQRQ NLDQQVLDLL CILDARLEES QFLLGNRPSM ADFAFYGPLM IHLYNDPQSN
HILETNAPRV CNWLFTIQEL GDTRGCVGQT ELGEWIDSET DLPPSLLELL KFVSQTYIPL
GRATAKASVL REKHFEASVY GIKTTFGASH YKAWAFEQTQ LRYRALTNDT KTKIDGILLE
TGILPGLLED GVLHNGLYDG FSPPFVKDGI PDARIKHLKE KQQQKKVV