Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2394 |
Symbol | |
ID | 6116665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2934031 |
End bp | 2934867 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641633900 |
Product | hypothetical protein |
Protein accession | YP_001760768 |
Protein GI | 170726742 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.265059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGTAGAA GTGTCGTAAT ATTTACATCA TTTTTTAGCA TTATCGTTTT TTCGGCACTT TTAGGCTGTG ATAATGTCGG GAATAACAAC ACTATTTGTA AAAATAATCC TGAACTTTGT GCCGATTTGC ATAAAGATAG TTGGTGTCGG TATGAGAAAT CAGACCTACT GAAGAGTCGT CTCAGGTTAA AACACGAACA ATCCCCTCCA GGTAAAGATC TTTATCATCA TCTGATACAT CTAGAGAAGT ACAATAAGTG CATTGAGCTT GCCTCTGGTG TGCAACACAT CCTACATCCA GAAAGAACCA ATGATAGAAC TCGAGCGTTT GGATTAAGTG CACAGAGTCT GGCTGAGCTT CAAGTTTCCA CTAAAGAGAG TAATGACCCT TACTTAGTTT ATTATCACTG GACCCGTTTT AATGATCAGG TGGCACAAGC TAAGATACTT CGTGCAGAGC GACTTAACCT TATCGATGAC ATTGAGATTT TGGCTGGGAT AGCTTCCTAT TATCAAAAAT ATGACCCTGC TAAAGCGCGA CAAGTATACT TGGCAGTATT TAATAAGAGT AATGAGGAGA ACTTTAACCC AGAATGGTTA TTGGGCTTAG CCAACACCTA TCAAAAGCTC AATGACTTGG AGATGACCTA CCTTCTCTCA AGAGCCAATA TCTTGATGAG TGAGAATCAA GTTTCTGAAA AAAGCATGTT GATGCTAATC AATGGTGATT CAGAGCTTAA GATATTTCTT GATGAGCATG CAGAGGAGTT AGTCGATTCA CTTCAATCGG GAAGTTATCA TTCCAGCAAA ATTAGGCGTA TCTTAGAGAA GGAGTAG
|
Protein sequence | MSRSVVIFTS FFSIIVFSAL LGCDNVGNNN TICKNNPELC ADLHKDSWCR YEKSDLLKSR LRLKHEQSPP GKDLYHHLIH LEKYNKCIEL ASGVQHILHP ERTNDRTRAF GLSAQSLAEL QVSTKESNDP YLVYYHWTRF NDQVAQAKIL RAERLNLIDD IEILAGIASY YQKYDPAKAR QVYLAVFNKS NEENFNPEWL LGLANTYQKL NDLEMTYLLS RANILMSENQ VSEKSMLMLI NGDSELKIFL DEHAEELVDS LQSGSYHSSK IRRILEKE
|
| |