Gene Swoo_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2394 
Symbol 
ID6116665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2934031 
End bp2934867 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content39% 
IMG OID641633900 
Producthypothetical protein 
Protein accessionYP_001760768 
Protein GI170726742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.265059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTAGAA GTGTCGTAAT ATTTACATCA TTTTTTAGCA TTATCGTTTT TTCGGCACTT 
TTAGGCTGTG ATAATGTCGG GAATAACAAC ACTATTTGTA AAAATAATCC TGAACTTTGT
GCCGATTTGC ATAAAGATAG TTGGTGTCGG TATGAGAAAT CAGACCTACT GAAGAGTCGT
CTCAGGTTAA AACACGAACA ATCCCCTCCA GGTAAAGATC TTTATCATCA TCTGATACAT
CTAGAGAAGT ACAATAAGTG CATTGAGCTT GCCTCTGGTG TGCAACACAT CCTACATCCA
GAAAGAACCA ATGATAGAAC TCGAGCGTTT GGATTAAGTG CACAGAGTCT GGCTGAGCTT
CAAGTTTCCA CTAAAGAGAG TAATGACCCT TACTTAGTTT ATTATCACTG GACCCGTTTT
AATGATCAGG TGGCACAAGC TAAGATACTT CGTGCAGAGC GACTTAACCT TATCGATGAC
ATTGAGATTT TGGCTGGGAT AGCTTCCTAT TATCAAAAAT ATGACCCTGC TAAAGCGCGA
CAAGTATACT TGGCAGTATT TAATAAGAGT AATGAGGAGA ACTTTAACCC AGAATGGTTA
TTGGGCTTAG CCAACACCTA TCAAAAGCTC AATGACTTGG AGATGACCTA CCTTCTCTCA
AGAGCCAATA TCTTGATGAG TGAGAATCAA GTTTCTGAAA AAAGCATGTT GATGCTAATC
AATGGTGATT CAGAGCTTAA GATATTTCTT GATGAGCATG CAGAGGAGTT AGTCGATTCA
CTTCAATCGG GAAGTTATCA TTCCAGCAAA ATTAGGCGTA TCTTAGAGAA GGAGTAG
 
Protein sequence
MSRSVVIFTS FFSIIVFSAL LGCDNVGNNN TICKNNPELC ADLHKDSWCR YEKSDLLKSR 
LRLKHEQSPP GKDLYHHLIH LEKYNKCIEL ASGVQHILHP ERTNDRTRAF GLSAQSLAEL
QVSTKESNDP YLVYYHWTRF NDQVAQAKIL RAERLNLIDD IEILAGIASY YQKYDPAKAR
QVYLAVFNKS NEENFNPEWL LGLANTYQKL NDLEMTYLLS RANILMSENQ VSEKSMLMLI
NGDSELKIFL DEHAEELVDS LQSGSYHSSK IRRILEKE