Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2381 |
Symbol | |
ID | 6116652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2919953 |
End bp | 2922532 |
Gene Length | 2580 bp |
Protein Length | 859 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641633887 |
Product | peptidase M1 membrane alanine aminopeptidase |
Protein accession | YP_001760755 |
Protein GI | 170726729 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.42945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.881926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCGAG TTATGGCCAC AAGCCTAATC ACAGCAGCAT TACTTAGCTG TAGCCAACTG CATGCAGAGC AGTTTGTGCT CAATAAACAC GCGAAACCTA TTTCTCAGGC GGTAAGTTTA GTCCTAGATC CCCATAAAGA TGATTTTTCA GGCAGTACAA ATATACAAAT ACAAGTACTT AAAAAAACTA AAATAATCCA GATAAACGGT GTTGATTACA CGACAAAAAA CATTAAATTA ACAGGCGATA GCCACTGTGA TATGTCCGCT AAGATGTTAG ATACCGGCAT CGTCAATCTT ATTTGTGATA CAGACATTTA CCCTGGTGAT TATCAGCTAC GTCTCGATTT TACCGCACCT TATAATCGTC AATCAGTGGG TCTATACAAA ACCATTGATG CCGGCGTGCC TTACCTTTTT ACGCAATTTG AGATGAGTGA TGCTCGTAGA AGTTTTCCGG TTTTCGACGA ACCAGAATAT AAAATCCCAT TCCAGATTAG CATAACAGCG CCATATGATG AGAAAGTTTA CAGCAATACT CCCTTGGTTA GCACTAAGAT TAATGGGAGC CAAAAAACTC ATCATTTTGC GCAGACTAAG CCATTATCTT CTTATTTAAT CGCTTACGCT GTGGGTAAGT TTGAGTCCAT TCCTGTTGAA GGGATGAAGA TCCCCGGTAA TGTGATCACC ACACAAGGAA AAGTAGAGCT TGCAAAGTAT GCCGTTAAAG AGATGCCTGC CATTTTAGCG CGTTTAGAGA ACTACTTTGG TGTTGATTAC CCTTATCAGA AGCTAGACTC TGTTGCTTTA CCTGAATTTC CTTTCGGTGC TATGGAAAAT GCAGGGCTTG TCACTTACCG TGAAGATATC CTGCTTCTAG ACGAAGCTGT GGCAAATCAA AATACTAAAC GTTCATCTAT ATCTGTTATC GCCCATGAGC TGGCACACCA ATGGTATGGT AACCTTGTTA CCATGAAATG GTGGAACGAT CTTTGGTTAA ATGAAGCATT TGCAAGTTGG ATGGCCGCTA AAGTTACTCA CGAGTTACAC CCTGAGTTTG AGTCGCATTT AAACCTATCT AAAAACAGAG TCATGAGTAT GGATGCGCGA CTCTCTACTA AACCGATCCG TAAGCCTATT AACACTGAAG CCGATATTAT GGACGGGTTG GGCTTAGCTT ATAGCAAAGG ATCTGCAGTA CTATCTATGG TTGAGAACTG GATTGGTGAG GAGGATTTTA AACAAGGGAT CCGTCAATAT ATTAAAGATC ATGCTTTTAA AAATACCAGT GCAGATGATC TTTGGAATGC CTTATCTAAG GCTTCAGGTA AAGATGTTGC TCAAGTACTA AGTACATTTA TAGAACAAGC ATCATACCCG CTTATTATGG TCAAGGTCAG TGGTAATAAC TTGAATCTTT CTCAGGAACG TTTTGTATTT GCTGGCAGTC AAGCATCAAG CCAGGAGTGG GTAGTACCTG TCTCAATCAA ATATGGGAAA GGGGATAAAC AGATCACTGA AACAGTACTA CTTGATAGTA AAAACAAACA GATAAAGCTT CAATTTACTC CAGATTGGGT ATATCCAGAT GCGGATGGAA TGGGTTACTA CCGATGGTTA TTAGGTGATA AGCAACTAAA TAACTTACTA AAAAACGCAA AAAATGTGCT CACCGACAGG GAGCGTAAAG CGTTAATATC TTCAGCAGAC GCACTACTTG CAGGCGGATT CATTACAGCC GGTGAGTTAC TCTCCATTCT TGGTGAATTT GTTGACGATG CACATCCGCA GGTTGTTTCA TCAGCATTAA GTTACCTGCA GATCCAGAAA GCTACTTTTG TTGATCAATC AAACGAAGCT AATTGGGCTA AGTTTATTAG CACAAAAGCT CGCAGTGCGA TTAATAAATA TGGCGAAGTG GCAATTGAAG GAGAGAGCAT AGCAATCAGC AAGTTGCGTC CTAGTCTTAT CTCAATTTTA GCCTTTGAAG GTAAGAACAA AACGATTATC GCAGCAGCCA AAAAAGCCAG TCTAGATTAC CTTGATGGTA GTAAGTCATT TGATGCTTAT CTCATTGGAA CTCAATTACA AATAGCTGTG TATTATGGAG ATAATGAATT AATACAAAAG TTTAAAACAG TCTTTGAAAC GACTAAGAAT CCACAAAAGA GAACACAATT AATGTATGCA CTGGGATTTG TTGCCGAAGA GAAGCAGCAA AAACAGATAC TGGATTATAG TTTAACAAAC AAGTTAAACT CTCCTGATCT TGGCTATATT ATGTATGGTC AGAGCTATAC TCAAGCAAGA AAAGAGATTT TTAGAACTTG GTTATATAAC AACTATGCTG CAGTAAAAAA TAAGTTACCT CCATTTTCCG TTGCAAAACT GCCGAACTAT GCAGGCGATG GTTGTGATTT AGTCGCACTC GATAAAACCA ACCTATTCTT TCAACCAAAA CTTAAAGATT CTCCCGAGTT TACACGCAGC TTGGCCAAGT TGAATGAGAA GGTAAAAAAC TGTGTACAGT TGAAAAATCG AGAACAGGCG AGTGTTGATC AGTACTTGCA GAAACATTAG
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Protein sequence | MYRVMATSLI TAALLSCSQL HAEQFVLNKH AKPISQAVSL VLDPHKDDFS GSTNIQIQVL KKTKIIQING VDYTTKNIKL TGDSHCDMSA KMLDTGIVNL ICDTDIYPGD YQLRLDFTAP YNRQSVGLYK TIDAGVPYLF TQFEMSDARR SFPVFDEPEY KIPFQISITA PYDEKVYSNT PLVSTKINGS QKTHHFAQTK PLSSYLIAYA VGKFESIPVE GMKIPGNVIT TQGKVELAKY AVKEMPAILA RLENYFGVDY PYQKLDSVAL PEFPFGAMEN AGLVTYREDI LLLDEAVANQ NTKRSSISVI AHELAHQWYG NLVTMKWWND LWLNEAFASW MAAKVTHELH PEFESHLNLS KNRVMSMDAR LSTKPIRKPI NTEADIMDGL GLAYSKGSAV LSMVENWIGE EDFKQGIRQY IKDHAFKNTS ADDLWNALSK ASGKDVAQVL STFIEQASYP LIMVKVSGNN LNLSQERFVF AGSQASSQEW VVPVSIKYGK GDKQITETVL LDSKNKQIKL QFTPDWVYPD ADGMGYYRWL LGDKQLNNLL KNAKNVLTDR ERKALISSAD ALLAGGFITA GELLSILGEF VDDAHPQVVS SALSYLQIQK ATFVDQSNEA NWAKFISTKA RSAINKYGEV AIEGESIAIS KLRPSLISIL AFEGKNKTII AAAKKASLDY LDGSKSFDAY LIGTQLQIAV YYGDNELIQK FKTVFETTKN PQKRTQLMYA LGFVAEEKQQ KQILDYSLTN KLNSPDLGYI MYGQSYTQAR KEIFRTWLYN NYAAVKNKLP PFSVAKLPNY AGDGCDLVAL DKTNLFFQPK LKDSPEFTRS LAKLNEKVKN CVQLKNREQA SVDQYLQKH
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