Gene Swoo_2376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2376 
Symbol 
ID6116647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2915550 
End bp2916224 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content42% 
IMG OID641633882 
Producthypothetical protein 
Protein accessionYP_001760750 
Protein GI170726724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0256417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.420009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATAA GTAACGTATT TATATTAATA GCTTACCTAT TATTGACCTC ATCGATGACC 
ATTGAAGCTA AAAACTTAGA CAGTGGGGCT GAGATATACT CTGACAGGTG CGTACTTTGC
CATGGAAATA AAGGGATGGG GGATGGTTAT ATTCCCATGA GGCTTAAGGG ATATCCTCAA
ACCAGTCTAT TTGAATCGCC TAAAGCAACC GACAAAACCG CTTTGGTTAA AGTTATCAGC
AAAGGTGTAC TCATCGACAC CGTAAATGAA TATATGCCTC CATGGGAGAG TGAGCTAACT
GAGGAGCAGA TATCAGACTT GGCTGACTTT GTGAGCTATT TAAGGTCGGA TACAGAAAAT
GCGTTAATTA TGCTCGAAAA ACACACCAGA AAACTGGATA AAACGGTTAG AGATGGCAGG
GTCATATTTG AGACTCGATG TGCCCTATGT CATGGAAAGC TAGGTCTCGG AGATGGACGT
ATGGCAAGGA TCATAAAAAA TCCACCACCA GCTGATTTAA CAAAAAGCAT TTTAACACCC
CACCAAATGG GGCTTATTAT CAAACTTGGA GGACAAGAGG TTGGTCGCTC TCCTAAAATG
CCCCCTTGGG GAGATTTTAT GACTGACAAC GAAGTGAACG CGGTTGTGGA CTTTATCGAT
ACCCTAAAAG ATTAG
 
Protein sequence
MKISNVFILI AYLLLTSSMT IEAKNLDSGA EIYSDRCVLC HGNKGMGDGY IPMRLKGYPQ 
TSLFESPKAT DKTALVKVIS KGVLIDTVNE YMPPWESELT EEQISDLADF VSYLRSDTEN
ALIMLEKHTR KLDKTVRDGR VIFETRCALC HGKLGLGDGR MARIIKNPPP ADLTKSILTP
HQMGLIIKLG GQEVGRSPKM PPWGDFMTDN EVNAVVDFID TLKD