| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2367 |
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| Symbol | |
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| ID | 6116638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2903255 |
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| End bp | 2904433 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633873 |
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| Product | RNA polymerase sigma 70 family subunit |
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| Protein accession | YP_001760741 |
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| Protein GI | 170726715 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACATA TTGAGATGAT CGAAGATGCC GTGCAGTTTG CGTTAACCAC GGCATTGGAT
AACTGGATAA GAGAGCAAAT ACCTAAAAAC CCCAGTGCAT GGCTTTTCAG GGTTGCGAGT
AATAAGCTCG TTAGCGAATT GAGAAGTGAG ACTAGGCATA ATGAGTTGTT GCAAGATAAC
CTTGAACAGC TGAGTAGAAG GGCGGCAGAA CCATCACAGT TTCATCTACC TAATGAACTT
GAAGATGAGA TGTTACGTAT GCTGTTTATC TGTTGCGATC ATAAAGTTCC AATCGAGTCA
CAGCTGATTT TTGCACTGAA ATCATTATGC GGATTTAGCA TAAGTGAAAT AGCTATTCGG
TTATTTTCAA GTGAAGCGAA TATTTATAAA CGTTTGAGCC GAGCACGTAA TACACTTAAA
AAGATTTCTC CTCCATCTTT TGAGTTATCA AATAGTGACT ACATAAAGCG CTTACCTTCA
GTAACCCGCA TACTCTACCT GATGTTTACT GAGGGGCACC TGTCCTCTAA TGTTGATTTT
GCAATTCGAA AAGATCTTTG TGAAGAAGCG ATACGGCTAA CTCTGATCTT AGTTAATCAC
TCTGTTGGAG ATAATCCTGA GTGCCATGCA TTACTCTCTT TAATGTTCCT CAATCTATCG
AGAATGAGTG CCAGAGAGGA TATGTCTGGC GCTTTACTTC TATTAGAAGA GCAGAACAGG
GAACTATGGG ACAGGGGTTG TATTGAACAT GGTCTCTACT GGTTAGCAAA ATCAGCTGAT
GGGCAGCATT TCTCTCGCTA TCATGCTGAA GCTGGCGTCG CTGCAGAGCA CTGTCTAGCT
TCCTCTTATA AGAAAACCAA TTGGGAGCGA ATCGTTGATT GTTACCTGTT ACTCGAGCAA
TCTGCGCCCT CGGCCCTTCA TCAGTTAAAT CGCGCAATAG CCATAGCAGA GTGGAAGGGA
CCACAGGCTG GATTAGAGGT TTTACAAGCT AACACTCCAC CAAGTTGGCT AGCCTCAAAT
TATCTATGGA GTGCTGTACT TGCAGATCTG CACCTTAGGG CTCGTGAGTA TCAGTTGGGT
GAGTACTATA GCATCGAAGC GATTCATTCT GCTCCAAGTC AACAGATTTG TGATCTCCTC
AAGCGAAGGT TTGCTAAGAG TCGTGGGGAA GGGCAGTAA
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| Protein sequence | MRHIEMIEDA VQFALTTALD NWIREQIPKN PSAWLFRVAS NKLVSELRSE TRHNELLQDN
LEQLSRRAAE PSQFHLPNEL EDEMLRMLFI CCDHKVPIES QLIFALKSLC GFSISEIAIR
LFSSEANIYK RLSRARNTLK KISPPSFELS NSDYIKRLPS VTRILYLMFT EGHLSSNVDF
AIRKDLCEEA IRLTLILVNH SVGDNPECHA LLSLMFLNLS RMSAREDMSG ALLLLEEQNR
ELWDRGCIEH GLYWLAKSAD GQHFSRYHAE AGVAAEHCLA SSYKKTNWER IVDCYLLLEQ
SAPSALHQLN RAIAIAEWKG PQAGLEVLQA NTPPSWLASN YLWSAVLADL HLRAREYQLG
EYYSIEAIHS APSQQICDLL KRRFAKSRGE GQ
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