| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2357 |
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| Symbol | |
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| ID | 6116628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2889581 |
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| End bp | 2890153 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641633863 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001760731 |
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| Protein GI | 170726705 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.946347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAAG TTAACGGCCC TACCTGCGTA ATCAATTCTC CTGAAAAAAT AACACAAATG
CATGAACTAC AGAAAAGGCC TGATGACTAC TTCTTCTGTT GGCCTTCAAT ATCAGAGCAT
CTTTACAAAT ACTGTAGATT CAAGTTAATG CTAAACCATT GGGATGCTGA GGATGTTGTC
GCAGACACAA TGCTTAAAGC TTATGATAAC TTCAAGACAG CTAATCCAAG TTCCAATATA
CAAGGGTGGT TAACCCTGCT TGCCAGAAAC ATACACTTCG ACCAAATCCG AAGATTTAAG
TCTATAAAAA ATAACGTTGA AGATGTTTTG AATAATAATA GTAACCTTAT TGATGAACCT
TTCAACAATA AGGCAGAAAT GAATTCTATT AAAGTAGTAA AAGAAGTAAT AAACAGACTT
AATGATAAAA ACAAAACAAT TACTTTTGAC TTTTTCTTTA ATGATAAAAA CTACAAAGAG
ATAAGTCATG AGTACGGTAT TCCTGCACAC CAAGTCAGAC AACGTATCCA CCGCTCAAGA
GAAAAGATTA AATTAACATT AAACAAAATA TAA
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| Protein sequence | MNKVNGPTCV INSPEKITQM HELQKRPDDY FFCWPSISEH LYKYCRFKLM LNHWDAEDVV
ADTMLKAYDN FKTANPSSNI QGWLTLLARN IHFDQIRRFK SIKNNVEDVL NNNSNLIDEP
FNNKAEMNSI KVVKEVINRL NDKNKTITFD FFFNDKNYKE ISHEYGIPAH QVRQRIHRSR
EKIKLTLNKI
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