| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2344 |
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| Symbol | |
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| ID | 6116615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2878752 |
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| End bp | 2879867 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633850 |
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| Product | gamma-butyrobetaine dioxygenase |
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| Protein accession | YP_001760718 |
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| Protein GI | 170726692 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | [TIGR02410] trimethyllysine dioxygenase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTATTC ACCGATGTGA GCGTGTAGGT GAAAGTCTTT CGATTCAATT TTCTAATAAT
AATGAAGCAA ACTTCAGTCT GTTTTGGTTA AGAGATCACA GTACCGATCC GTCCAGCCTT
AACCCCAGTA CATTACAACG AGATGTTGAA ACCTTTTCCT TACCCGCTGT TCCAGGGCTA
AAACAGTTCC AAGTGATTAA TAACGGAGCT CAACTACAGA TCCAGTGGTT GGACGGCGAT
CGAGTCAGCG AGTTTGATGC ACATTTCCTT TTTAATATGG CCTGTACGCC AGTTGATGAA
CCACCATATC AGTTGTGGGC AAGCGAGTTA CAAGAGCAAG TTCCAGATTT TGATTTTGAA
CAGGTAACGG CTAACGACGC TGCTTTTTTG CCTGTATTAG AAAGTATGGA GCAGTATGGT
TTAGTGACAT TTTCTGGCAT GCCGTCAAAT ATGGAAGCGA CTAAAAAGTT GCTCAATCAA
GTCGGGTATA TCCGAGATAC CGTATTTGGC AGTTTATGGG ACTTTTCAAA TAACGGCGCT
CATAGTGACA GTGCCTATAC CAGTGTTGGC ATAGGGCTAC ACACTGATAG CACCTATACA
ATTGACCCGC CAGGCTTGCA GTTATTGCAT TGTTTGGCTT TTGATGGAGA AGGGGCTTTT
AATCAATTTG CCGATGGTTT TAAAGTTGCT CAAACCATTA AGAGTGAAGA TCCTGCCGCT
TATGAGACGC TAAAAAGAAT TAAGGTACCT GCACACTATA TTGAACCTGG TATTCAATTA
AGAGGCCAGC ATGAGGTTGT GCGGGAAGAT ATTAATGGCC TGTTTGAACA GATTTGTTTT
AACAACTTTG ATCGCAGCCC ATTTATGTTA AGTACAAGTG AGCAAAAGGC TTTTTATCAT
GCTTATGGTC TGTTTCAACG TTTAATTAAT GACCCAAAAT TTCAGGTGAG CTTTCAATTG
CAACCAGGGC GAGCTGTCTG GTTTGATAAT TGGCGTGTTC TACATGCGCG CAGCGCTTTT
AGCGGTTTTC GTCATCTTGC TGGCGGCTAC ACGAATCGAG AAGATTACAT CAGCAAAAAG
TTAACCTTAA GAGGGAAAAC ACCATGGCAG GAGTGA
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| Protein sequence | MFIHRCERVG ESLSIQFSNN NEANFSLFWL RDHSTDPSSL NPSTLQRDVE TFSLPAVPGL
KQFQVINNGA QLQIQWLDGD RVSEFDAHFL FNMACTPVDE PPYQLWASEL QEQVPDFDFE
QVTANDAAFL PVLESMEQYG LVTFSGMPSN MEATKKLLNQ VGYIRDTVFG SLWDFSNNGA
HSDSAYTSVG IGLHTDSTYT IDPPGLQLLH CLAFDGEGAF NQFADGFKVA QTIKSEDPAA
YETLKRIKVP AHYIEPGIQL RGQHEVVRED INGLFEQICF NNFDRSPFML STSEQKAFYH
AYGLFQRLIN DPKFQVSFQL QPGRAVWFDN WRVLHARSAF SGFRHLAGGY TNREDYISKK
LTLRGKTPWQ E
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