| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2314 |
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| Symbol | |
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| ID | 6116585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2842758 |
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| End bp | 2843918 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633820 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_001760688 |
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| Protein GI | 170726662 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000283744 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000379293 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTAGAAA TACTGTTTCT GTTACTTCCC ATTGCCGCAG GTTACGGTTG GTACATGGGG
CGTCGAAGTG TCAGACATAA GCAGAGTAGT GATCGTAAAA AGTTAAGTCG GGATTATTTT
ACTGGTCTAA ATTTCCTTCT TTCCAATGAG TCTGATAAAG CGGTTGATCT CTTTATCTCT
ATGCTCGATG TCGATGATGA CACCATAGAT ACCCACCTTT CCCTTGGCTC CTTGTTCAGA
AAACGTGGTG AAGTCGATCG CTCCATCCGC ATTCATCAAA ACCTGATAGC AAGACCTAGC
CTTGGCAATG AGCAACGTGA TATTGCCATG ATGGAGCTAG GCAAGGATTA TCAAGCCGCT
GGCTTTTATG ATCGTGCTGA GGAGATATTT CTTAATCTGG TCAAACAGGA AGATCACAGT
GAGGTGGCTG AAGAGCATCT GATTGATATC TACCAGATAA CGAAAGATTG GCAGAAGGCG
ATCAACATCA TTAAAACGCT TAAACGCAAG CGTCAGCAGT GTTTTAAGCA CAACACTGCA
CATTTTTACT GTGAACTCGC CGATGAGGAA ACTGAGAGTA GTGAACAAGT AAAATTACTA
CAATCAGCCA TTAAATTGGA CTCAAATTGT GCTAGGGCGC TTCTTACCCT CGCCAGGCAA
TATCTGGAGT TAGGTGAATT TGCCAAATGT ATTGAGATGC TCACGAAGCT TATCGATGCT
GATATTGACC TAGTTCCTGA TGCATTATCT ACCGCGAAAC AGGCCTTTAT TAAAAAAGGA
GATCAAGTAG GTTACTGCGA ATATCTCCGC CTTGCGCTTT CTGAGGGAGC TGGCGCTAGT
GTGGCGGTCA ATCTAGCCCA CAACTTAATT GAGCAGGGCG AACACAAAGA AGCTGAGAAA
CTAATTTTAG ATGGCTTGTA TCGTAATCCG ACGATGAAAA GCTTTCAGCA CTTAATGCAG
ATGCATGTAC AGCAAGCTGA AGAGGGGCAA GCGAAAACGA GTTTAACCAT GTTAGAGAAG
CTGGTTGAAC AGCAGATTAA GTATCGACCT GGTTACCGGT GCAGTGAATG CGGCTTTCCC
TCCCACAGCC TGTATTGGCA TTGTCCCTCT TGTAAACACT GGGGCAGTAT TAAGCGCATT
CGTGGATTAG ATGGTGAGTG A
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| Protein sequence | MLEILFLLLP IAAGYGWYMG RRSVRHKQSS DRKKLSRDYF TGLNFLLSNE SDKAVDLFIS
MLDVDDDTID THLSLGSLFR KRGEVDRSIR IHQNLIARPS LGNEQRDIAM MELGKDYQAA
GFYDRAEEIF LNLVKQEDHS EVAEEHLIDI YQITKDWQKA INIIKTLKRK RQQCFKHNTA
HFYCELADEE TESSEQVKLL QSAIKLDSNC ARALLTLARQ YLELGEFAKC IEMLTKLIDA
DIDLVPDALS TAKQAFIKKG DQVGYCEYLR LALSEGAGAS VAVNLAHNLI EQGEHKEAEK
LILDGLYRNP TMKSFQHLMQ MHVQQAEEGQ AKTSLTMLEK LVEQQIKYRP GYRCSECGFP
SHSLYWHCPS CKHWGSIKRI RGLDGE
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